RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 GRB7Q14451 532 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 PDK4Q16654 411 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 PARP15Q460N3 678 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 NADK2Q4G0N4 442 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 SAMD4BQ5PRF9 694 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC25A24Q6NUK1 477 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 Q6ZN92 141 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 ZNF540Q8NDQ6 660 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 IPMKQ8NFU5 416 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 TMEM158Q8WZ71 300 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 SYAP1Q96A49 352 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 EML4Q9HC35 981 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 RNF14Q9UBS8 474 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 SH3BGRL2Q9UJC5 107 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 F5H6K3 240 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 NBR2O15453 112 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 OPN1MWP04001 364 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 OPN1MW2P0DN77 364 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 OPN1MW3P0DN78 364 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 HSPA5P11021 654 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 RPA2P15927 270 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 NPR2P20594 1047 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 FMO3P31513 532 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 MAP3K8P41279 467 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 ARRB1P49407 418 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 CBX1P83916 185 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 KLRC3Q07444 240 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 GTF3C1Q12789 2109 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 MICBQ29980 383 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 ZNF691Q5VV52 312 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 CES3Q6UWW8 571 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 HSDL2Q6YN16 418 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 CCDC80Q76M96 950 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 LINC01551Q86U37 167 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC26A11Q86WA9 606 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 MAIP1Q8WWC4 291 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 THRSPQ92748 146 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 EFHD2Q96C19 240 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 CMTM7Q96FZ5 175 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 SENP8Q96LD8 212 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 TGM7Q96PF1 710 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 PELOQ9BRX2 385 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 HDHD3Q9BSH5 251 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC17A9Q9BYT1 436 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 RAB34Q9BZG1 259 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 VCXQ9H320 206 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 CYTL1Q9NRR1 136 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 RPL36Q9Y3U8 105 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 AP1M2Q9Y6Q5 423 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 FRMPD3Q5JV73 1810 aa2.79□□□□□ -1.96
SMCHD1-204ENST00000581226 PDS5BQ9NTI5 1447 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 IGKV2D-24A0A075B6R9 120 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 A0A0G2JLM5 398 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 A0A0G2JN53 185 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 IGHV3-64DA0A0J9YX35 117 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 LAD1O00515 517 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 RGS16O15492 202 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 NOL3O60936 208 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 AP2A1O95782 977 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 UGT2B4P06133 528 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 ADRB3P13945 408 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 CCDC130P13994 396 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 POU2F1P14859 743 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 LAP3P28838 519 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 SOX6P35712 828 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 GPM6AP51674 278 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 PAX5Q02548 391 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 ASPHQ12797 758 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 GGTLC2Q14390 218 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 GANABQ14697 944 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 ATP6AP1Q15904 470 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC15A2Q16348 729 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 KCTD19Q17RG1 926 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 MARCH8Q5T0T0 291 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 TSPO2Q5TGU0 170 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 OR2G6Q5TZ20 316 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 TTC23Q5W5X9 447 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 CTRB2Q6GPI1 263 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 TMEM225Q6GV28 225 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 PAQR7Q86WK9 346 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 ZNF683Q8IZ20 524 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 TMEM61Q8N0U2 210 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 ANKFN1Q8N957 763 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 TIMD4Q96H15 378 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 FCRL1Q96LA6 429 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 MRPL45Q9BRJ2 306 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 PLA2G2FQ9BZM2 168 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 ACTR6Q9GZN1 396 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 RAB33BQ9H082 229 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 RBKSQ9H477 322 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 REEP4Q9H6H4 257 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 SIAEQ9HAT2 523 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 RAB18Q9NP72 206 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 HOXC10Q9NYD6 342 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 PSG11Q9UQ72 335 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 MEMO1Q9Y316 297 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 NACAE9PAV3 2078 aa2.78□□□□□ -1.96
SMCHD1-204ENST00000581226 MAP3K15Q6ZN16 1313 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 NSG1A0A0A6YYJ2 146 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms