RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 MIER2Q8N344 545 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 OR9K2Q8NGE7 335 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 OR52E4Q8NGH9 312 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 SPATA9Q9BWV2 254 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 C1QTNF6Q9BXI9 259 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 SLC17A5Q9NRA2 495 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 YAE1D1Q9NRH1 226 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 ADPRHL2Q9NX46 363 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 ZNF443Q9Y2A4 671 aaPredicted RBP12.05□□□□□ -0.48
GGA3-208ENST00000579743 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
GGA3-208ENST00000579743 FN1P02751 2386 aaKnown RBP12.05□□□□□ -0.48
GGA3-208ENST00000579743 A0A1W2PR80 420 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 LIPT2A6NK58 231 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 AQP7P3A6NL99 342 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 E7EQL1 145 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 ZNF587BE7ETH6 402 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 CD5LO43866 347 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 AKR7A3O95154 331 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 AHSA1O95433 338 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 ITGA5P08648 1049 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 TFPTP0C1Z6 253 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 GKN3PP0CG01 181 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 ETFAP13804 333 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 CDH2P19022 906 aaPredicted RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 UBE2NP61088 152 aaKnown RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 TSPO2Q5TGU0 170 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 C1orf140Q5VVS0 124 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 PRAMEF8Q5VWM4 474 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 PRAMEF7Q5VXH5 474 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 ZNF836Q6ZNA1 936 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 VRK2Q86Y07 508 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 TMEM99Q8N816 258 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 STK35Q8TDR2 534 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 SLC38A5Q8WUX1 472 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 SLC35B4Q969S0 331 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 MAELQ96JY0 434 aaKnown RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 ZNF317Q96PQ6 595 aaPredicted RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 AMBRA1Q9C0C7 1298 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 SDR39U1Q9NRG7 319 aaPredicted RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 RLIMQ9NVW2 624 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 SELENONQ9NZV5 590 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 GDF2Q9UK05 429 aaPredicted RBP12.04□□□□□ -0.48
GGA3-208ENST00000579743 RASD1Q9Y272 281 aa12.04□□□□□ -0.48
GGA3-208ENST00000579743 CADP27708 2225 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 ZC3H12DA2A288 527 aaKnown RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 ELOA3DA6NLF2 546 aaPredicted RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 H7C417 338 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 SLC25A16P16260 332 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 PPIBP23284 216 aaKnown RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 WDR4P57081 412 aaKnown RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 MAGOHP61326 146 aaKnown RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 FADDQ13158 208 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 ELOA3BQ3SY89 546 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 PODNL1Q6PEZ8 512 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 C5orf46Q6UWT4 87 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 PRIMA1Q86XR5 153 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 KRT73Q86Y46 540 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 GOLGA6L1Q8N7Z2 621 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 MAPK1IP1LQ8NDC0 245 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 ELOA3Q8NG57 546 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 FAM168AQ92567 244 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 AURKBQ96GD4 344 aaPredicted RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 TMEM19Q96HH6 336 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 SPATA5L1Q9BVQ7 753 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
GGA3-208ENST00000579743 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 DSPPQ9NZW4 1301 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 TLN2Q9Y4G6 2542 aa12.03□□□□□ -0.48
GGA3-208ENST00000579743 A8MV72 311 aaPredicted RBP12.02□□□□□ -0.49
GGA3-208ENST00000579743 PDLIM1O00151 329 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 CLIC1O00299 241 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 KLF11O14901 512 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 POLR3GO15318 223 aaPredicted RBP12.02□□□□□ -0.49
GGA3-208ENST00000579743 AKAP8O43823 692 aaKnown RBP12.02□□□□□ -0.49
GGA3-208ENST00000579743 OR2T1O43869 369 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 NDUFS7O75251 213 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 CRYAAP02489 173 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 ZNF43P17038 809 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 PTNP21246 168 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 NTF4P34130 210 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 ACAA2P42765 397 aaKnown RBP12.02□□□□□ -0.49
GGA3-208ENST00000579743 EFNA4P52798 201 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 SH3BGRP55822 239 aaPredicted RBP12.02□□□□□ -0.49
GGA3-208ENST00000579743 PLAURQ03405 335 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 C1DQ13901 141 aaKnown RBP12.02□□□□□ -0.49
GGA3-208ENST00000579743 HMBOX1Q6NT76 420 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 DNM1P46Q6ZS02 220 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 WDR31Q8NA23 367 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 MFSD8Q8NHS3 518 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 BBS10Q8TAM1 723 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 JMJD1CQ15652 2540 aa12.02□□□□□ -0.49
GGA3-208ENST00000579743 KIAA1324LA8MWY0 1029 aaPredicted RBP12.01□□□□□ -0.49
GGA3-208ENST00000579743 TGDSO95455 350 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 ERCC1P07992 297 aaPredicted RBP12.01□□□□□ -0.49
GGA3-208ENST00000579743 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms