RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
CDKN2A-213ENST00000579122 LOC100289279A0A1B0GTE1 492 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 TMEM72A0PK05 275 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 PRAMEF27A3QJZ7 478 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 AP3D1O14617 1153 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 EDF1O60869 148 aaKnown RBP16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 CPSF4O95639 269 aaKnown RBP16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 C8BP07358 591 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 NR4A2P43354 598 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 CBX1P83916 185 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 GGTLC2Q14390 218 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 GPAT3Q53EU6 434 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 KLHL24Q6TFL4 600 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 HMGN2P46Q86SG4 172 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 ANKRD46Q86W74 232 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 CNOT9Q92600 299 aaKnown RBP16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 DPY30Q9C005 99 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 AKTIPQ9H8T0 292 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 MYOZ1Q9NP98 299 aaPredicted RBP16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 FGFR1OP2Q9NVK5 253 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 PNPOQ9NVS9 261 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 MOKQ9UQ07 419 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 RAP2CQ9Y3L5 183 aa16.77■□□□□ 0.28
CDKN2A-213ENST00000579122 SLC35F4A4IF30 521 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 FAAHO00519 579 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 TACR3P29371 465 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 CHI3L1P36222 383 aaPredicted RBP16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 SLC1A3P43003 542 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 SNRPD2P62316 118 aaKnown RBP16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 FAM120AOSQ5T036 256 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 ZNF781Q8N8C0 355 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 POMGNT2Q8NAT1 580 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 TESCQ96BS2 214 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 MSI2Q96DH6 328 aaKnown RBP16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 SORCS2Q96PQ0 1159 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 SF3B5Q9BWJ5 86 aaKnown RBP16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 PRR14Q9BWN1 585 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 PIF1Q9H611 641 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 CHODLQ9H9P2 273 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 OBP2BQ9NPH6 170 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 MARCOQ9UEW3 520 aaPredicted RBP16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 HAO1Q9UJM8 370 aa16.76■□□□□ 0.27
CDKN2A-213ENST00000579122 HEATR1Q9H583 2144 aaKnown RBP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 LOC390937A0A1W2PQ73 354 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 HMGN4O00479 90 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 APEHP13798 732 aaKnown RBP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 HNF1AP20823 631 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 PAX7P23759 505 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 RPL14P50914 215 aaKnown RBP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 HIKESHIQ53FT3 197 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 OTUD3Q5T2D3 398 aaPredicted RBP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 ABHD12BQ7Z5M8 362 aaPredicted RBP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 ZIC4Q8N9L1 334 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 OR9K2Q8NGE7 335 aa16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 TRNT1Q96Q11 434 aaKnown RBP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDKN2A-213ENST00000579122 MALRD1Q5VYJ5 2156 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 ZC3H12DA2A288 527 aaKnown RBP16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 AGAP5A6NIR3 686 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 KITP10721 976 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 UQCRBP14927 111 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 DRD4P21917 467 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 GNA13Q14344 377 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 PDCD2Q16342 344 aaPredicted RBP16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 DPY19L1Q2PZI1 675 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 IL17RELQ6ZVW7 336 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 AAED1Q7RTV5 226 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 PPP1R36Q96LQ0 422 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 FOXN4Q96NZ1 517 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 SLC38A2Q96QD8 506 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 SLC35A5Q9BS91 424 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 ADAM19Q9H013 955 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 FAM107BQ9H098 131 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 SLC38A1Q9H2H9 487 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
CDKN2A-213ENST00000579122 ARFGEF3Q5TH69 2177 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 IGHV1-18A0A0C4DH31 117 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 IGHV4-61A0A0C4DH41 118 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 CFAP73A6NFT4 308 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 LIPT2A6NK58 231 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 B9A039 149 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 GPIP06744 558 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 CDH2P19022 906 aaPredicted RBP16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 SERPINF1P36955 418 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 CLNS1AP54105 237 aaKnown RBP16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 TXNL4AP83876 142 aaKnown RBP16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 EPS8Q12929 822 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 SYPL1Q16563 259 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 GSTA3Q16772 222 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 LRRC74BQ6ZQY2 392 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 SLC46A3Q7Z3Q1 461 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 CPLX4Q7Z7G2 160 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 TMEM99Q8N816 258 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 ANKFN1Q8N957 763 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 ZNF540Q8NDQ6 660 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 WDR60Q8WVS4 1066 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 ZNF385AQ96PM9 386 aaKnown RBP16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 KCNS3Q9BQ31 491 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 KATNB1Q9BVA0 655 aa16.73■□□□□ 0.27
CDKN2A-213ENST00000579122 NSRP1Q9H0G5 558 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms