RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PDZD2O15018 2839 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 TEP1Q99973 2627 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 MTORP42345 2549 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ABCA4P78363 2273 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 PHF3Q92576 2039 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 TRAV36DV7A0A075B6V5 113 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 IGKV3D-15A0A087WSY6 115 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 CPSF4LA6NMK7 179 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 M0R3H8 397 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 NDUFAB1O14561 156 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 CLOCKO15516 846 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 OR6A2O95222 327 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 GOSR1O95249 250 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF682O95780 498 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 IMPDH2P12268 514 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF43P17038 809 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 GGT1P19440 569 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 PSMB1P20618 241 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 CBLP22681 906 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 AHCYP23526 432 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 HOXC12P31275 282 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 IFNA8P32881 189 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 LSP1P33241 339 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 PCGF2P35227 344 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 NUDT2P50583 147 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ART1P52961 327 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 H3F3AP84243 136 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 TGFBR3Q03167 851 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 PMS2P3Q13401 168 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 DUSP7Q16829 419 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 GLIPR1L2Q4G1C9 344 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 LRRC23Q53EV4 343 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 BEX5Q5H9J7 111 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 C9orf135Q5VTT2 229 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 FAM91A1Q658Y4 838 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 C5orf46Q6UWT4 87 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 TFAP2EQ6VUC0 442 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 FKBP9P1Q75LS8 142 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 H1FNTQ75WM6 255 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ABHD12BQ7Z5M8 362 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 NET1Q7Z628 596 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ARPINQ7Z6K5 226 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ATG4DQ86TL0 474 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 GABRG1Q8N1C3 465 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 OR2T12Q8NG77 320 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 OR9K2Q8NGE7 335 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 MFSD8Q8NHS3 518 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 LZICQ8WZA0 190 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 SLC38A4Q969I6 547 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 KTI12Q96EK9 354 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 TPD52L3Q96J77 140 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF583Q96ND8 569 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 HOPXQ9BPY8 73 aaPredicted RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 SF3B5Q9BWJ5 86 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ASPNQ9BXN1 380 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 LIME1Q9H400 295 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 ESRP2Q9H6T0 727 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 UBTD1Q9HAC8 227 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 C12orf10Q9HB07 376 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 TESQ9UGI8 421 aaKnown RBP5.81□□□□□ -1.48
TRAF4-213ENST00000578917 PRSS50Q9UI38 385 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 BAG5Q9UL15 447 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 RASD1Q9Y272 281 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 PLEKHA6Q9Y2H5 1048 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 CHST2Q9Y4C5 530 aa5.81□□□□□ -1.48
TRAF4-213ENST00000578917 EXPH5Q8NEV8 1989 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ITPR3Q14573 2671 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ELOVL7A1L3X0 281 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 TRAPPC13A5PLN9 417 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 AQP7P3A6NL99 342 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF726A6NNF4 738 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF716A6NP11 495 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF814B7Z6K7 855 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 TPST2O60704 377 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 FMO6PO60774 539 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 RAMP1O60894 148 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 CNOT4O95628 575 aaKnown RBP5.8□□□□□ -1.48
TRAF4-213ENST00000578917 LGI1O95970 557 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 RAF1P04049 648 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 HRGP04196 525 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 DRD4P21917 467 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 CRYGSP22914 178 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 HTR2AP28223 471 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 SLC16A1P53985 500 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 IST1P53990 364 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 NR1H2P55055 460 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 CDH12P55289 794 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 PCBP3P57721 371 aaKnown RBP5.8□□□□□ -1.48
TRAF4-213ENST00000578917 TAS2R41P59536 307 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 MXRA7P84157 204 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 LIPEQ05469 1076 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 VEZF1Q14119 521 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 SLC17A1Q14916 467 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 MFSD13AQ14CX5 517 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 PPA1Q15181 289 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 CYBRD1Q53TN4 286 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ENTPD8Q5MY95 495 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 SWT1Q5T5J6 900 aaKnown RBP5.8□□□□□ -1.48
TRAF4-213ENST00000578917 FAM69AQ5T7M9 428 aa5.8□□□□□ -1.48
TRAF4-213ENST00000578917 ABLIM2Q6H8Q1 611 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms