RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ELFN1P0C7U0 828 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 ACADLP28330 430 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 PRKAR1BP31321 381 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 LRRC37A5PQ49AS3 106 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 YOD1Q5VVQ6 348 aaPredicted RBP13.26□□□□□ -0.29
SMG6-215ENST00000574501 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 OR4C6Q8NH72 309 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 AICDAQ9GZX7 198 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 C6orf106Q9H6K1 298 aaPredicted RBP13.26□□□□□ -0.29
SMG6-215ENST00000574501 IL21RQ9HBE5 538 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 ASF1BQ9NVP2 202 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 ZNF443Q9Y2A4 671 aaPredicted RBP13.26□□□□□ -0.29
SMG6-215ENST00000574501 A0A0A6YYD5 115 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 CRYBA1P05813 215 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ITPKBP27987 946 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ATXN7L3Q14CW9 347 aaPredicted RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 ZNF836Q6ZNA1 936 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ZNF547Q8IVP9 402 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 OR51S1Q8NGJ8 323 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 THAP6Q8TBB0 222 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 GLYATL2Q8WU03 294 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 TMEM239Q8WW34 195 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 SLC35A4Q96G79 324 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ZNF471Q9BX82 626 aaPredicted RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 ZNF223Q9UK11 482 aaPredicted RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 SLC35A3Q9Y2D2 325 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ATG4BQ9Y4P1 393 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 V9GY05 133 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 A0A1W2PR48 441 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 TMEM200CA6NKL6 621 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 SULT1B1O43704 296 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 POP7O75817 140 aaKnown RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 PAK4O96013 591 aaPredicted RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 ZNF3P17036 446 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ITGB8P26012 769 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 BDKRB2P30411 391 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 PPIAP62937 165 aaKnown RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 ACTC1P68032 377 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ACTA1P68133 377 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 MRM1Q6IN84 353 aaKnown RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 SLC16A11Q8NCK7 471 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 OR56A1Q8NGH5 318 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 OR8S1Q8NH09 359 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ZNF461Q8TAF7 563 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 ING5Q8WYH8 240 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
SMG6-215ENST00000574501 CACYBPQ9HB71 228 aaKnown RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 USP36Q9P275 1121 aaKnown RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 PCYT1BQ9Y5K3 369 aaPredicted RBP13.25□□□□□ -0.29
SMG6-215ENST00000574501 KANTRA0A1W2PQU2 76 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 RBBP9O75884 186 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 CTSLP07711 333 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 F3P13726 295 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 HTR2AP28223 471 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 SRSF3P84103 164 aaKnown RBP13.24□□□□□ -0.29
SMG6-215ENST00000574501 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 MICBQ29980 383 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 JMJD6Q6NYC1 403 aaPredicted RBP13.24□□□□□ -0.29
SMG6-215ENST00000574501 FRRS1Q6ZNA5 592 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 GLB1L2Q8IW92 636 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 CYB5D2Q8WUJ1 264 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 DVL3Q92997 716 aaPredicted RBP13.24□□□□□ -0.29
SMG6-215ENST00000574501 TRMT2BQ96GJ1 504 aaKnown RBP13.24□□□□□ -0.29
SMG6-215ENST00000574501 LMLNQ96KR4 655 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 PIGMQ9H3S5 423 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 C2orf42Q9NWW7 574 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 ZNF337Q9Y3M9 751 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 C4orf51C9J302 202 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 GRM6O15303 877 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 RCBTB2O95199 551 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 ZNF806P0C7X5 589 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 CBR1P16152 277 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 RORAP35398 523 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 CAPZA2P47755 286 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 ZNF136P52737 540 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 BLOC1S1P78537 153 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 RBMS3Q6XE24 437 aaKnown RBP13.24□□□□□ -0.29
SMG6-215ENST00000574501 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 TMPRSS9Q7Z410 1059 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 SDR9C7Q8NEX9 313 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 RXFP4Q8TDU9 374 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 CDS1Q92903 461 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 BPIFA2Q96DR5 249 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 GPR174Q9BXC1 333 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 TSPAN10Q9H1Z9 355 aaPredicted RBP13.24□□□□□ -0.29
SMG6-215ENST00000574501 EXO5Q9H790 373 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 GSN-AS1Q9NRJ2 163 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
SMG6-215ENST00000574501 H3BSH0 61 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 SULT1C2O00338 296 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 EMC8O43402 210 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 FGF18O76093 207 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 MPIP34949 423 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 HYAL4Q2M3T9 481 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 PRAMEF8Q5VWM4 474 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 PRAMEF7Q5VXH5 474 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 RPL22L1Q6P5R6 122 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms