RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 THTPAQ9BU02 230 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 GP6Q9HCN6 339 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 KLHL9Q9P2J3 617 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-213ENST00000573577 EMC9Q9Y3B6 208 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 HCFC1P51610 2035 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 FBN2P35556 2912 aa12.09□□□□□ -0.47
RPAIN-213ENST00000573577 ZC3H12DA2A288 527 aaKnown RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 NPIPB7O75200 414 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 PRKD3O94806 890 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 THRBP10828 461 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 TNFRSF1BP20333 461 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 GTF2E2P29084 291 aaKnown RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 MSX2P35548 267 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 CTBP2P56545 445 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 TRIM25Q14258 630 aaKnown RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 MFSD13AQ14CX5 517 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 TTC33Q6PID6 262 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 CYP4Z1Q86W10 505 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 DHFR2Q86XF0 187 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 CNEP1R1Q8N9A8 125 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 PIGXQ8TBF5 258 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 ROBO4Q8WZ75 1007 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 SLC7A6OSQ96CW6 309 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 SLC41A3Q96GZ6 507 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 PRRC1Q96M27 445 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 TMEM43Q9BTV4 400 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 PIGMQ9H3S5 423 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 KCNN3Q9UGI6 736 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 SLC7A7Q9UM01 511 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 FAM32AQ9Y421 112 aaKnown RBP12.08□□□□□ -0.48
RPAIN-213ENST00000573577 TEX15Q9BXT5 2789 aa12.08□□□□□ -0.48
RPAIN-213ENST00000573577 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 CYTIPO60759 359 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 PDE5AO76074 875 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 IMPDH2P12268 514 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 ITGA2P17301 1181 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 FPR1P21462 350 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 PEX19P40855 299 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 EGR4Q05215 589 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 RASGEF1BQ0VAM2 473 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 ST3GAL3Q11203 375 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 PIN1Q13526 163 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-213ENST00000573577 OR7A5Q15622 319 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 TMEM201Q5SNT2 666 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 FAM69AQ5T7M9 428 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 PAQR6Q6TCH4 344 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 DCHS2Q6V1P9 2916 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 CCDC121Q6ZUS5 278 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 FAM214BQ7L5A3 538 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 OR6S1Q8NH40 331 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 CCDC124Q96CT7 223 aaKnown RBP12.07□□□□□ -0.48
RPAIN-213ENST00000573577 ASB9Q96DX5 294 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 PYURFQ96I23 114 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 SLC19A3Q9BZV2 496 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 TRIM15Q9C019 465 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 AMBRA1Q9C0C7 1298 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 EMC3Q9P0I2 261 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 RIMS3Q9UJD0 308 aa12.07□□□□□ -0.48
RPAIN-213ENST00000573577 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 IGHV3-15A0A0B4J1V0 119 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 EBAG9O00559 213 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 SMAD9O15198 467 aaKnown RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 SS18L1O75177 396 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 RBM34P42696 430 aaKnown RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 KIR2DL2P43627 348 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 RPS5P46782 204 aaKnown RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 SIRPAP78324 504 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 H3F3AP84243 136 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 TLE4Q04727 773 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 TRAP1Q12931 704 aaKnown RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 SNTB1Q13884 538 aaKnown RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 PDK3Q15120 406 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 GUSBP1Q15486 140 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 ABLIM2Q6H8Q1 611 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 LCN8Q6JVE9 175 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 VWA1Q6PCB0 445 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 CYP2R1Q6VVX0 501 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 LINC00114Q6XXX2 140 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 KIF18BQ86Y91 864 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 ABHD3Q8WU67 409 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 SLC25A36Q96CQ1 311 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 KTI12Q96EK9 354 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 DNAJA3Q96EY1 480 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 HS6ST2Q96MM7 605 aa12.06□□□□□ -0.48
RPAIN-213ENST00000573577 RBM24Q9BX46 236 aaKnown RBP12.06□□□□□ -0.48
RPAIN-213ENST00000573577 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms