RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SLC15A4Q8N697 577 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ZNF321PQ8N8H1 164 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 RADILQ96JH8 1075 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 HDHD2Q9H0R4 259 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ANKRD19PQ9H560 264 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CALHM2Q9HA72 323 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 WIF1Q9Y5W5 379 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 TEX13CA0A0J9YWL9 993 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ANXA2P2A6NMY6 339 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 NADKO95544 446 aaPredicted RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 SPINK2P20155 84 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CSRP1P21291 193 aaKnown RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 TBXA2RP21731 343 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CHMP24386 653 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 SLC37A1P57057 533 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CAMK2DQ13557 499 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ZNF766Q5HY98 468 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 PLAG1Q6DJT9 500 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 Q6ZPB1 254 aaPredicted RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 M1APQ8TC57 530 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 SARAFQ96BY9 339 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 WDR12Q9GZL7 423 aaKnown RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 CES1P1Q9UKY3 287 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CLEC4AQ9UMR7 237 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 TVP23AA6NH52 213 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 GPR171O14626 319 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 AKR7A3O95154 331 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 ATE1O95260 518 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 CD79AP11912 226 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 DUSP2Q05923 314 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 FUT7Q11130 342 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 POU4F2Q12837 409 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 RAB39AQ14964 217 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 MPEG1Q2M385 716 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 CALHM3Q86XJ0 350 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 MARCH9Q86YJ5 346 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 PSMA8Q8TAA3 256 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 FOXN4Q96NZ1 517 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 FAM173AQ9BQD7 235 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 CRNNQ9UBG3 495 aaPredicted RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 NOSIPQ9Y314 301 aaKnown RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 EMC9Q9Y3B6 208 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 HSPE1-MOB4S4R3N1 261 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 ALPK2Q86TB3 2170 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 C2orf16Q68DN1 1984 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 A0A1B0GVI7 797 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 CENPXA8MT69 81 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 C4orf51C9J302 202 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 H0YC42 278 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 PRRG2O14669 202 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 FKBP2P26885 142 aaKnown RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 GGT2P36268 569 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 PSG6Q00889 435 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 SELENBP1Q13228 472 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 NIPAL3Q6P499 406 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 TMPRSS7Q7RTY8 843 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 OR5J2Q8NH18 312 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 PFN4Q8NHR9 129 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 AP3S1Q92572 193 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 FCRL1Q96LA6 429 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 VSTM2LQ96N03 204 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 TMED9Q9BVK6 235 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 CHRNA10Q9GZZ6 450 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 ACER3Q9NUN7 267 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 CENPBD1B2RD01 187 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 M0R082 166 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 PIP5K1CO60331 668 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 ALPLP05186 524 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 GDI2P50395 445 aaKnown RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 CXADRP78310 365 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 TSTQ16762 297 aaKnown RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 KIRREL2Q6UWL6 708 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 RASSF6Q6ZTQ3 369 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 PRICKLE2Q7Z3G6 844 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 ZNF417Q8TAU3 575 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 ZNF587Q96SQ5 575 aaPredicted RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 POLE4Q9NR33 117 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 SLC6A5Q9Y345 797 aa9.24□□□□□ -0.93
SMG6-213ENST00000573166 MRPS18BQ9Y676 258 aaKnown RBP9.24□□□□□ -0.93
SMG6-213ENST00000573166 H7C1C5 153 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 TAF4O00268 1085 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 NKX2-8O15522 239 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 DAPP51397 102 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 BIDP55957 195 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 LCN6P62502 163 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 PUDPQ08623 228 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 TAB1Q15750 504 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 H1FNTQ75WM6 255 aaPredicted RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 PIWIL3Q7Z3Z3 882 aaKnown RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 ABHD12BQ7Z5M8 362 aaPredicted RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 HTRA1Q92743 480 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 ZNF566Q969W8 418 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 NIPSNAP1Q9BPW8 284 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 KLHL13Q9P2N7 655 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 ERVK-18Q9QC07 812 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 CXCL13O43927 109 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 CD14P08571 375 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 FGFBP1Q14512 234 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SYT14P1Q58G82 188 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms