RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ZNF433Q8N7K0 673 aaPredicted RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 STAG3L4Q8TBR4 150 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 ACTRT2Q8TDY3 377 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 RNF128Q8TEB7 428 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 LINGO1Q96FE5 620 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 SLC35A4Q96G79 324 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 REXO5Q96IC2 774 aaKnown RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 C16orf92Q96LL3 132 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 CADM1Q9BY67 442 aaKnown RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 PLK3Q9H4B4 646 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 EHD1Q9H4M9 534 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 C7orf69Q9H7B7 122 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 PTGES2Q9H7Z7 377 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 TNFRSF19Q9NS68 423 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 C1RLQ9NZP8 487 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 NTMQ9P121 344 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 STOML1Q9UBI4 398 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 BCAP29Q9UHQ4 241 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 SLC13A4Q9UKG4 626 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 RNF114Q9Y508 228 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 A0A0J9YW62 118 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CIB4A0PJX0 185 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 SYCE1LA8MT33 242 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 SDHDO14521 159 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 TO15178 435 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ADAMDEC1O15204 470 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 SLC16A6O15403 523 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 GMFGO60234 142 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 DEAF1O75398 565 aaPredicted RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 ATP6V1G2O95670 118 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 GPANK1O95872 356 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 LPLP06858 475 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 RPS17P08708 135 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 OR4A8P0C604 315 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ANPEPP15144 967 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CD22P20273 847 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 COX5AP20674 150 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 DRD5P21918 477 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 GDF5P43026 501 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 OR3A2P47893 321 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 MRPL19P49406 292 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 ATP4BP51164 291 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CLNS1AP54105 237 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 CARD18P57730 90 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 KLF10Q13118 480 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 LAPTM5Q13571 262 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 EFR3AQ14156 821 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 EXOSC7Q15024 291 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 OR4D1Q15615 310 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 TMEM44Q2T9K0 475 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 LSM12Q3MHD2 195 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 DNAL1Q4LDG9 190 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 KLHL22Q53GT1 634 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ZNF311Q5JNZ3 666 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CFAP157Q5JU67 520 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CDKL4Q5MAI5 379 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 C6orf163Q5TEZ5 329 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 DCAF12L2Q5VW00 463 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 OR4C11Q6IEV9 310 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ACSM5Q6NUN0 579 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 METTL2BQ6P1Q9 378 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 FAM111BQ6SJ93 734 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 LARP4Q71RC2 724 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD3-213ENST00000571249 R3HCC1LQ7Z5L2 792 aaKnown RBP5.94□□□□□ -1.46
CHD3-213ENST00000571249 TEX9Q8N6V9 391 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CEP70Q8NHQ1 597 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 RNF138Q8WVD3 245 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CMTM5Q96DZ9 223 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 Q96M66 194 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 OR52B2Q96RD2 323 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 B9D2Q9BPU9 175 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ALG9Q9H6U8 611 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 TMEM185BQ9H7F4 350 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 MEAF6Q9HAF1 191 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 TCF7L2Q9NQB0 619 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 TAS2R16Q9NYV7 291 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ASH2LQ9UBL3 628 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 PHF11Q9UIL8 331 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 ICAM5Q9UMF0 924 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 CFL2Q9Y281 166 aa5.94□□□□□ -1.46
CHD3-213ENST00000571249 DNAH10Q8IVF4 4471 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 A0A1W2PR48 441 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 SH3PXD2BA1X283 911 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 C9JVG2 144 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 PGRMC2O15173 223 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 GYG2O15488 501 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 TSPAN2O60636 221 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 CLPXO76031 633 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 WDR47O94967 919 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ZNF205O95201 554 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 CBX7O95931 251 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 TGFB1P01137 390 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 RAB6AP20340 208 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 IL12BP29460 328 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 KRT20P35900 424 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 FEN1P39748 380 aaKnown RBP5.93□□□□□ -1.46
CHD3-213ENST00000571249 PPICP45877 212 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 HSPA7P48741 367 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ALDH9A1P49189 494 aa5.93□□□□□ -1.46
CHD3-213ENST00000571249 ALDH18A1P54886 795 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms