RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 OTUD3Q5T2D3 398 aaPredicted RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 Q71RC1 249 aaPredicted RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 SMAP2Q8WU79 429 aaPredicted RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 GTPBP3Q969Y2 492 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 SPATA9Q9BWV2 254 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 TAPBPLQ9BX59 468 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 ADAM19Q9H013 955 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 PAIP1Q9H074 479 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 A4GALTQ9NPC4 353 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 PARPBPQ9NWS1 579 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 IFT52Q9Y366 437 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 FLVCR1Q9Y5Y0 555 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 HEATR5AQ86XA9 2040 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 DPRXA6NFQ7 191 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 LIPT2A6NK58 231 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 ABCD4O14678 606 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 SMAD7O15105 426 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 PGM3O95394 542 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 SOD3P08294 240 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 HOXB4P17483 251 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 ACAA2P42765 397 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 IDH3AP50213 366 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 AQP5P55064 265 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 CEACAM7Q14002 265 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC17A1Q14916 467 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZNF311Q5JNZ3 666 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRAMEF8Q5VWM4 474 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRAMEF7Q5VXH5 474 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 OR7E24Q6IFN5 339 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 KLHL17Q6TDP4 642 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM108Q6UXF1 575 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 SERPINA11Q86U17 422 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 LSRQ86X29 649 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 CLIP4Q8N3C7 705 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 OR52N5Q8NH56 324 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 LILRB1Q8NHL6 650 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 BBS10Q8TAM1 723 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 NEUROG1Q92886 237 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 MAL2Q969L2 176 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 SPDL1Q96EA4 605 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 TRMT61AQ96FX7 289 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 EBF4Q9BQW3 602 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 TRIM2Q9C040 744 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 BCL2L10Q9HD36 194 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 ADPRHL2Q9NX46 363 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 NPAP1Q9NZP6 1156 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 CCDC167Q9P0B6 97 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 UPB1Q9UBR1 384 aa10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 MAGED1Q9Y5V3 778 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-205ENST00000570828 RAI1Q7Z5J4 1906 aaPredicted RBP10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 A8MVM7 634 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 AKR7A3O95154 331 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 AHSA1O95433 338 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 ITGA5P08648 1049 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 DANCRP0C864 163 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRG2P13727 222 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 PPIBP23284 216 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 NTF4P34130 210 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 TGFBR3Q03167 851 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 BNIP2Q12982 314 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 ETFDHQ16134 617 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 TTMPQ5BVD1 217 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 GCNT6Q5T4J0 391 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 GPAT4Q86UL3 456 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 OR9K2Q8NGE7 335 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 OR52E4Q8NGH9 312 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM45BQ96B21 275 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 RADILQ96JH8 1075 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 SF3B5Q9BWJ5 86 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC25A37Q9NYZ2 338 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 CISD1Q9NZ45 108 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 DCTN4Q9UJW0 460 aa10.88□□□□□ -0.67
CTDNEP1-205ENST00000570828 USF3Q68DE3 2245 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 HMGB1P1B2RPK0 211 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SHISA9B4DS77 424 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 FRS3O43559 492 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 LY6G6DO95868 133 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 ETS2P15036 469 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 HOXB9P17482 250 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 PTAFRP25105 342 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 GTF2E2P29084 291 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 CDKN1AP38936 164 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZNF83P51522 516 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 IRX1P78414 480 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 VEZF1Q14119 521 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SQLEQ14534 574 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 PGGHGQ32M88 737 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 AGKQ53H12 422 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 LRIF1Q5T3J3 769 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 TSPO2Q5TGU0 170 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 C9orf135Q5VTT2 229 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 C1orf140Q5VVS0 124 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 KLHL24Q6TFL4 600 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 AAED1Q7RTV5 226 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms