RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FTCDNL1E5RQL4 147 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 M0QX08 132 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 M0R3H8 397 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 SLC22A2O15244 555 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 FZD7O75084 574 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 MRPL33O75394 65 aaKnown RBP11.51□□□□□ -0.57
CNOT1-220ENST00000569916 AHSA1O95433 338 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 NPPAP01160 153 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 IGHV3-9P01782 118 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 CD53P19397 219 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 CRYBA2P53672 197 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 NCALDP61601 193 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 KEAP1Q14145 624 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 NRF1Q16656 503 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 DUSP7Q16829 419 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 VMACQ2NL98 169 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 ELOA3BQ3SY89 546 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 ALG10BQ5I7T1 473 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 FAM91A1Q658Y4 838 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 SEZ6L2Q6UXD5 910 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 BHLHA15Q7RTS1 189 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-220ENST00000569916 CALHM3Q86XJ0 350 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 ELOA3Q8NG57 546 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 MFSD8Q8NHS3 518 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 DNAJA4Q8WW22 397 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-220ENST00000569916 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-220ENST00000569916 ARHGDIGQ99819 225 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 SF3B5Q9BWJ5 86 aaKnown RBP11.51□□□□□ -0.57
CNOT1-220ENST00000569916 PIF1Q9H611 641 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 EVA1AQ9H8M9 152 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 MALT1Q9UDY8 824 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 SLC13A4Q9UKG4 626 aa11.51□□□□□ -0.57
CNOT1-220ENST00000569916 PRRC2AP48634 2157 aaKnown RBP11.51□□□□□ -0.57
CNOT1-220ENST00000569916 A0A0B4J2E0 115 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 LOC100653049A0A140TA62 436 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 A0A1B0GX12 115 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 KRT34O76011 436 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 LGI1O95970 557 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 PNMTP11086 282 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 CD247P20963 164 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 RPS5P46782 204 aaKnown RBP11.5□□□□□ -0.57
CNOT1-220ENST00000569916 OR1Q1Q15612 314 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 NPTX1Q15818 432 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 ULK3Q6PHR2 472 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 PATL1Q86TB9 770 aaKnown RBP11.5□□□□□ -0.57
CNOT1-220ENST00000569916 RANBP3LQ86VV4 465 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-220ENST00000569916 UBE2J2Q8N2K1 259 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 POU5F2Q8N7G0 328 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF433Q8N7K0 673 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-220ENST00000569916 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 OR9K2Q8NGE7 335 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 SLC38A4Q969I6 547 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 TMEM45BQ96B21 275 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 TAMM41Q96BW9 452 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 PLPPR2Q96GM1 343 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF385AQ96PM9 386 aaKnown RBP11.5□□□□□ -0.57
CNOT1-220ENST00000569916 ALPK1Q96QP1 1244 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 SH3GL1Q99961 368 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
CNOT1-220ENST00000569916 ASB6Q9NWX5 421 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 USP22Q9UPT9 525 aa11.5□□□□□ -0.57
CNOT1-220ENST00000569916 PDLIM1O00151 329 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 FMO6PO60774 539 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 RAD51DO75771 328 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 C8BP07358 591 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 ITGA5P08648 1049 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 NR1H2P55055 460 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 FOXG1P55316 489 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-220ENST00000569916 FAPQ12884 760 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 DEFB113Q30KQ7 82 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 FAM69AQ5T7M9 428 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
CNOT1-220ENST00000569916 ALKBH2Q6NS38 261 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 C5orf46Q6UWT4 87 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 CCDC80Q76M96 950 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 GPAT4Q86UL3 456 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 P3H2Q8IVL5 708 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 PCYOX1LQ8NBM8 494 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 OR4D11Q8NGI4 311 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 OR6T1Q8NGN1 323 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 HSD17B8Q92506 261 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 TAAR8Q969N4 342 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 SLC25A36Q96CQ1 311 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 RCN3Q96D15 328 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 SLC47A1Q96FL8 570 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 ECSITQ9BQ95 431 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 TMEM204Q9BSN7 226 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 UBTD1Q9HAC8 227 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 TMEM27Q9HBJ8 222 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 SLC7A10Q9NS82 523 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 PARPBPQ9NWS1 579 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 GID8Q9NWU2 228 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 TAS2R16Q9NYV7 291 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 SEC14L4Q9UDX3 406 aa11.49□□□□□ -0.57
CNOT1-220ENST00000569916 TRAV36DV7A0A075B6V5 113 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 A0A087WUJ7 227 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms