RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MRPL19P49406 292 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC35A1P78382 337 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 HOXC5Q00444 222 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 CEACAM7Q14002 265 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 PAQR6Q6TCH4 344 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 LINGO2Q7L985 606 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 SERPINA11Q86U17 422 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 MSRB3Q8IXL7 192 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 OR52P1PQ8NH57 321 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 STON2Q8WXE9 905 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 ZHX1-C8orf76Q96EF9 292 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 TMEM19Q96HH6 336 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 ITCHQ96J02 903 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 EBF4Q9BQW3 602 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 TPT1P8Q9HAU6 139 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 ZNF443Q9Y2A4 671 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 TMEM229AB2RXF0 380 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 M0R1B8 84 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 GPRIN2O60269 458 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 NPIPB7O75200 414 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 CRLF1O75462 422 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 ANP32DO95626 131 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 KRT75O95678 551 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 ZCCHC18P0CG32 403 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 TTKP33981 857 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 IDUAP35475 653 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 MAGEA8P43361 318 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 GUCY1A3Q02108 690 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 OR7A5Q15622 319 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 ETFDHQ16134 617 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC2A7Q6PXP3 512 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 GTF2H4Q92759 462 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 MAL2Q969L2 176 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 TMEM45BQ96B21 275 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 DDIT4LQ96D03 193 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 TRMT61AQ96FX7 289 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 DHRS9Q9BPW9 319 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 SIKE1Q9BRV8 207 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 PTDSS2Q9BVG9 487 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 CACNG6Q9BXT2 260 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 PAIP1Q9H074 479 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC17A5Q9NRA2 495 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC25A37Q9NYZ2 338 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 P2RX2Q9UBL9 471 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC9A8Q9Y2E8 581 aa12.12□□□□□ -0.47
GTF3C1-211ENST00000569653 AQP7P3A6NL99 342 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 FTCDNL1E5RQL4 147 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 SSX4O60224 188 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 EDF1O60869 148 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 LY6HO94772 140 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 PTAFRP25105 342 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 CRATP43155 626 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 ATP4BP51164 291 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 DSTNP60981 165 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 PPP2R2BQ00005 443 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 EGR4Q05215 589 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 DMTNQ08495 405 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 HIKESHIQ53FT3 197 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 C6orf10Q5SRN2 563 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 RNF220Q5VTB9 566 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC22A25Q6T423 547 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 TMEM108Q6UXF1 575 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 EPHX4Q8IUS5 362 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 FUNDC1Q8IVP5 155 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 PEX5LQ8IYB4 626 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 CADM2Q8N3J6 435 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 OR10H5Q8NGA6 315 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 PMM1Q92871 262 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 C3orf49Q96BT1 292 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC52A3Q9NQ40 469 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 TMEM45AQ9NWC5 275 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 SEC14L4Q9UDX3 406 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 DCTN4Q9UJW0 460 aa12.11□□□□□ -0.47
GTF3C1-211ENST00000569653 SVEP1Q4LDE5 3571 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 ATP6V1G2-DDX39BF2Z307 99 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 BMP2P12643 396 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 SELENOPP49908 381 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 SQLEQ14534 574 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 WBP2NLQ6ICG8 309 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 NANOS1Q8WY41 292 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 HS6ST2Q96MM7 605 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 NAA11Q9BSU3 229 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 RABEP2Q9H5N1 569 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 SEC61A2Q9H9S3 476 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 NPHS2Q9NP85 383 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 ADPRHL2Q9NX46 363 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 SLAMF8Q9P0V8 285 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 TRIM33Q9UPN9 1127 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms