RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 S100A3P33764 101 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 NR4A2P43354 598 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 GZMKP49863 264 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
NME3-211ENST00000568561 UFM1P61960 85 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 SNRPD2P62316 118 aaKnown RBP13.53□□□□□ -0.24
NME3-211ENST00000568561 EPS8Q12929 822 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 FAM120AOSQ5T036 256 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 FAM166AQ6J272 317 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 VHLLQ6RSH7 139 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 SLC46A3Q7Z3Q1 461 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 SPATA19Q7Z5L4 167 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 CMIPQ8IY22 773 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 CADM2Q8N3J6 435 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■■■■□ 24.4
NME3-211ENST00000568561 FOXN4Q96NZ1 517 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 TRNT1Q96Q11 434 aaKnown RBP13.53□□□□□ -0.24
NME3-211ENST00000568561 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 RAP2CQ9Y3L5 183 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 CCDC154A6NI56 674 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 AQP7P3A6NL99 342 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 NR5A2O00482 541 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 KRT33AO76009 404 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 ALDOCP09972 364 aaKnown RBP13.52□□□□□ -0.25
NME3-211ENST00000568561 NR2F1P10589 423 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 APEHP13798 732 aaKnown RBP13.52□□□□□ -0.25
NME3-211ENST00000568561 IL7RP16871 459 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 LBPP18428 481 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 IL12AP29459 219 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 SELENOPP49908 381 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
NME3-211ENST00000568561 TBRG1Q3YBR2 411 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 ZNF836Q6ZNA1 936 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 LINGO2Q7L985 606 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 VRK2Q86Y07 508 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 POMGNT2Q8NAT1 580 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 OR1K1Q8NGR3 316 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 PMM1Q92871 262 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 PANX1Q96RD7 426 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 SOX7Q9BT81 388 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 PNPOQ9NVS9 261 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 BTNL2Q9UIR0 455 aa13.52□□□□□ -0.25
NME3-211ENST00000568561 A0A096LPE4 126 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 A0A1W2PPZ6 126 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 FAAHO00519 579 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 GPIP06744 558 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 DBIP07108 87 aaKnown RBP13.51□□□□□ -0.25
NME3-211ENST00000568561 UQCRBP14927 111 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 BGNP21810 368 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 CXCR1P25024 350 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 SLC1A6P48664 564 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 MAPK11Q15759 364 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 DPY19L1Q2PZI1 675 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 ZNF621Q6ZSS3 439 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 KCNS3Q9BQ31 491 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 ROPN1BQ9BZX4 212 aaPredicted RBP13.51□□□□□ -0.25
NME3-211ENST00000568561 ADAM19Q9H013 955 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 ROPN1Q9HAT0 212 aaPredicted RBP13.51□□□□□ -0.25
NME3-211ENST00000568561 CA10Q9NS85 328 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 SLC6A13Q9NSD5 602 aa13.51□□□□□ -0.25
NME3-211ENST00000568561 ZNF587BE7ETH6 402 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 HAX1O00165 279 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 FRS3O43559 492 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 UPK3AO75631 287 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 OR4A8P0C604 315 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 CECR9P0C854 216 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 PRG2P13727 222 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 CALCRP30988 508 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 SERPINF1P36955 418 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 P2RY4P51582 365 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 GNA13Q14344 377 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 ADIPOQQ15848 244 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 IQCCQ4KMZ1 466 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 RPS26P11Q5JNZ5 115 aaPredicted RBP13.5□□□□□ -0.25
NME3-211ENST00000568561 NIPAL3Q6P499 406 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
NME3-211ENST00000568561 TRIML2Q8N7C3 387 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 AENQ8WTP8 325 aaKnown RBP13.5□□□□□ -0.25
NME3-211ENST00000568561 OR52E6Q96RD3 313 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 SF3B5Q9BWJ5 86 aaKnown RBP13.5□□□□□ -0.25
NME3-211ENST00000568561 BPESC1Q9GZL8 116 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 NELFAQ9H3P2 528 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
NME3-211ENST00000568561 AIG1Q9NVV5 245 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 TMEM45AQ9NWC5 275 aa13.5□□□□□ -0.25
NME3-211ENST00000568561 LRP5LA4QPB2 252 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 CDHR4A6H8M9 788 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 NDUFS8O00217 210 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 TGFAP01135 160 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 CRYAAP02489 173 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 PGRP06401 933 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 CELA3BP08861 270 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
NME3-211ENST00000568561 UBE2NP61088 152 aaKnown RBP13.49□□□□□ -0.25
NME3-211ENST00000568561 NAAAQ02083 359 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 KRT71Q3SY84 523 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms