RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 UBASH3BQ8TF42 649 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 TSPEARQ8WU66 669 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 GTF2H4Q92759 462 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 TMIGD2Q96BF3 282 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF764Q96H86 408 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 CCDC115Q96NT0 180 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 PANX1Q96RD7 426 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 ADOQ96SZ5 270 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 CITED1Q99966 193 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 GLIPR2Q9H4G4 154 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 TIGARQ9NQ88 270 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SLC6A13Q9NSD5 602 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 MED11Q9P086 117 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SLAMF8Q9P0V8 285 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 PSME2Q9UL46 239 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF780BQ9Y6R6 833 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 A0A096LPI6 279 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PRSS51A0A1B0GVH4 220 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 MYO1GB0I1T2 1018 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 FXYD1O00168 92 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 RFXANKO14593 260 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 TNFSF11O14788 317 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 SCO2O43819 266 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 ATP5HO75947 161 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 KCNH1O95259 989 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PGM3O95394 542 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 YES1P07947 543 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 CT62P0C5K7 136 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 SAGP10523 405 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 CPMP14384 443 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 CSNK2A2P19784 350 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 GPC1P35052 558 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PCGF2P35227 344 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 SERPINF1P36955 418 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PPICP45877 212 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 XKP51811 444 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 MNAT1P51948 309 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 MANFP55145 182 aaKnown RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 HBA1P69905 142 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 RIN1Q13671 783 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 LTB4RQ15722 352 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF362Q5T0B9 420 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 DLEU7Q6UYE1 221 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 ESPNLQ6ZVH7 1005 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 SZRD1Q7Z422 152 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 DPP10Q8N608 796 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 VPS37AQ8NEZ2 397 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 OR4F5Q8NH21 305 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 OR5AK3PQ8NH89 298 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 CLDND2Q8NHS1 167 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 ZFP28Q8NHY6 868 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 RNF128Q8TEB7 428 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 ABHD3Q8WU67 409 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 C1GALT1C1Q96EU7 318 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 SLC35A4Q96G79 324 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 AURKBQ96GD4 344 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF681Q96N22 645 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 AMDHD1Q96NU7 426 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 KCNS3Q9BQ31 491 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
CAPN3-216ENST00000567071 NARFLQ9H6Q4 476 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 TAS2R7Q9NYW3 318 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PRODH2Q9UF12 536 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 BTNL2Q9UIR0 455 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 PCDHGB4Q9UN71 923 aa8.43□□□□□ -1.06
CAPN3-216ENST00000567071 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 RNF103-CHMP3A0A140T963 221 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF814B7Z6K7 855 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 ANKRD65E5RJM6 399 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 G3V4G9 280 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 TO15178 435 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 GYG2O15488 501 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 RAD51DO75771 328 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 PRKD3O94806 890 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 C1QCP02747 245 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 KRT16P08779 473 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 GAAP10253 952 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 PORP16435 677 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF17P17021 662 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 ADRA2CP18825 462 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 COX5AP20674 150 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 DRD5P21918 477 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 OMGP23515 440 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 FRKP42685 505 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-216ENST00000567071 GPR6P46095 362 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-216ENST00000567071 OR3A2P47893 321 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 CLK3P49761 638 aaKnown RBP8.42□□□□□ -1.06
CAPN3-216ENST00000567071 CARD18P57730 90 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 MTPNP58546 118 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 PSME3P61289 254 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 PSPHP78330 225 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 MRPS35P82673 323 aaKnown RBP8.42□□□□□ -1.06
CAPN3-216ENST00000567071 SELPLGQ14242 412 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 TAF9Q16594 264 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 LRIF1Q5T3J3 769 aa8.42□□□□□ -1.06
CAPN3-216ENST00000567071 TMEM107Q6UX40 140 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms