RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 Q9H521 79 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 SERINC1Q9NRX5 453 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 KCNN3Q9UGI6 736 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 TESQ9UGI8 421 aaKnown RBP12.05□□□□□ -0.48
CLK3-218ENST00000566926 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 ABCA12Q86UK0 2595 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 A0A1W2PRQ8 180 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 SAC3D1A6NKF1 404 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 H0YC42 278 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 TNFRSF11BO00300 401 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 OIP5O43482 229 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 H1F0P07305 194 aaKnown RBP12.04□□□□□ -0.48
CLK3-218ENST00000566926 ZNF26P17031 533 aaPredicted RBP12.04□□□□□ -0.48
CLK3-218ENST00000566926 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
CLK3-218ENST00000566926 RRM2P31350 389 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 UQCRC1P31930 480 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 RNF144AP50876 292 aaPredicted RBP12.04□□□□□ -0.48
CLK3-218ENST00000566926 ALDH3A2P51648 485 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 TPD52P55327 224 aaPredicted RBP12.04□□□□□ -0.48
CLK3-218ENST00000566926 SPIBQ01892 262 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 SELENBP1Q13228 472 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 SKP2Q13309 424 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 DGCR6Q14129 220 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 QPRTQ15274 297 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 MAPK14Q16539 360 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 LRRC36Q1X8D7 754 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 NDUFAF6Q330K2 333 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 HBMQ6B0K9 141 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 DEF8Q6ZN54 512 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 OLIG3Q7RTU3 272 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 OFCC1Q8IZS5 231 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 GCNT2Q8N0V5 402 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 CBR4Q8N4T8 237 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 OR10D3Q8NH80 312 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 OR2V1Q8NHB1 315 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 ZNF563Q8TA94 476 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 DNAJC9Q8WXX5 260 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 PSD2Q9BQI7 771 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 ZNF559Q9BR84 538 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 FNDC11Q9BVV2 318 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 RNF122Q9H9V4 155 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 EXOSC3Q9NQT5 275 aaKnown RBP12.04□□□□□ -0.48
CLK3-218ENST00000566926 GLRX2Q9NS18 164 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 USE1Q9NZ43 259 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 JKAMPQ9P055 326 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 ENOPH1Q9UHY7 261 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 LRRC42Q9Y546 428 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 ORC6Q9Y5N6 252 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 LYVE1Q9Y5Y7 322 aa12.04□□□□□ -0.48
CLK3-218ENST00000566926 A0A1W2PNV4 684 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 M0R3H8 397 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 ETV2O00321 342 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 TNFSF11O14788 317 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 MSTNO14793 375 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 OR5F1O95221 314 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 GADD45GO95257 159 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 CDH2P19022 906 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 TNFRSF1BP20333 461 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 AGFG1P52594 562 aaKnown RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 CARD18P57730 90 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 SORDQ00796 357 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 ST3GAL3Q11203 375 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 FOXF2Q12947 444 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 MYBPHQ13203 477 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 C3orf33Q6P1S2 294 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 STK32CQ86UX6 486 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 EPHX4Q8IUS5 362 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 ZNF295-AS1Q8N0V1 137 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 CNEP1R1Q8N9A8 125 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 FAM71CQ8NEG0 241 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 OR6T1Q8NGN1 323 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 VANGL1Q8TAA9 524 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 FNDC9Q8TBE3 224 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 OSTF1Q92882 214 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 CPNE4Q96A23 557 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 ZNF845Q96IR2 970 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 ADGRG7Q96K78 797 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 NPAS1Q99742 590 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 COQ10BQ9H8M1 238 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 NMNAT1Q9HAN9 279 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 ACER3Q9NUN7 267 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 TMCC3Q9ULS5 477 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 RAB26Q9ULW5 256 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 CHST2Q9Y4C5 530 aa12.03□□□□□ -0.48
CLK3-218ENST00000566926 SPIN1Q9Y657 262 aaPredicted RBP12.03□□□□□ -0.48
CLK3-218ENST00000566926 A0A0J9YW62 118 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 CENPVL1A0A0U1RR11 272 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 FAAHO00519 579 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 CXCL13O43927 109 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 NTN1O95631 604 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 PLGP00747 810 aaPredicted RBP12.02□□□□□ -0.49
CLK3-218ENST00000566926 ANXA8P13928 327 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 PRF1P14222 555 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 ACADSP16219 412 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 SFTPDP35247 375 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 IFNGR2P38484 337 aa12.02□□□□□ -0.49
CLK3-218ENST00000566926 APOBEC1P41238 236 aaKnown RBP12.02□□□□□ -0.49
CLK3-218ENST00000566926 KIR2DL3P43628 341 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms