RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 IDO1P14902 403 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
RNF40-209ENST00000566703 COPZ1P61923 177 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 MAPK11Q15759 364 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 TMEM249Q2WGJ8 235 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 LIN52Q52LA3 116 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 CEP85LQ5SZL2 805 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 KLHL24Q6TFL4 600 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 FAM168AQ92567 244 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 ZNF317Q96PQ6 595 aaPredicted RBP13.12□□□□□ -0.31
RNF40-209ENST00000566703 PAIP2Q9BPZ3 127 aaKnown RBP13.12□□□□□ -0.31
RNF40-209ENST00000566703 TAPBPLQ9BX59 468 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 TMEM45AQ9NWC5 275 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 DSPPQ9NZW4 1301 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 A0A096LPI6 279 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 SLC22A3O75751 556 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 AKR7A3O95154 331 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 TFPTP0C1Z6 253 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 EPHA3P29320 983 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 MVDP53602 400 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 CRISP3P54108 245 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 LARS2Q15031 903 aaKnown RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 OR7A5Q15622 319 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 C3orf36Q3SXR2 165 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 PDCD4Q53EL6 469 aaKnown RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 C6orf52Q5T4I8 152 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 MSANTD1Q6ZTZ1 278 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 VRK2Q86Y07 508 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 STK35Q8TDR2 534 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 C10orf105Q8TEF2 133 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 SLC35B4Q969S0 331 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 AURKBQ96GD4 344 aaPredicted RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 ZNF385AQ96PM9 386 aaKnown RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 CENPHQ9H3R5 247 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 WDR55Q9H6Y2 383 aaPredicted RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 RMND5AQ9H871 391 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
RNF40-209ENST00000566703 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 CDC42EP3Q9UKI2 254 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 RASD1Q9Y272 281 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 CR1P17927 2039 aa13.11□□□□□ -0.31
RNF40-209ENST00000566703 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 HNRNPCL3B7ZW38 293 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
RNF40-209ENST00000566703 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
RNF40-209ENST00000566703 GKN3PP0CG01 181 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 FAM157CP0CG43 387 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 HNRNPCL4P0DMR1 293 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 SLC18A1P54219 525 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 DSTNP60981 165 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 SLC25A3Q00325 362 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 SWI5Q1ZZU3 235 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 MST1LQ2TV78 715 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 CYB5R2Q6BCY4 276 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 CREB3L2Q70SY1 520 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 ZNF525Q8N782 197 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 PNPT1Q8TCS8 783 aaKnown RBP13.1□□□□□ -0.31
RNF40-209ENST00000566703 MAGEE2Q8TD90 523 aaPredicted RBP13.1□□□□□ -0.31
RNF40-209ENST00000566703 SLC38A5Q8WUX1 472 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 TMEM158Q8WZ71 300 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 ITCHQ96J02 903 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 MAELQ96JY0 434 aaKnown RBP13.1□□□□□ -0.31
RNF40-209ENST00000566703 SPATA9Q9BWV2 254 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 TPT1P8Q9HAU6 139 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 CACYBPQ9HB71 228 aaKnown RBP13.1□□□□□ -0.31
RNF40-209ENST00000566703 ZIM2Q9NZV7 527 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 RAB21Q9UL25 225 aa13.1□□□□□ -0.31
RNF40-209ENST00000566703 TMEM247A6NEH6 219 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 RNF212BA8MTL3 300 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 NDUFS8O00217 210 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 NPIPB7O75200 414 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 KRT33AO76009 404 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ANP32DO95626 131 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ETFAP13804 333 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 USF1P22415 310 aaPredicted RBP13.09□□□□□ -0.31
RNF40-209ENST00000566703 CRATP43155 626 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 P2RY4P51582 365 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 WDR4P57081 412 aaKnown RBP13.09□□□□□ -0.31
RNF40-209ENST00000566703 TBRG1Q3YBR2 411 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ATG16L1Q676U5 607 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ZNF836Q6ZNA1 936 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ALPK2Q86TB3 2170 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 GPAT4Q86UL3 456 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 CLIP4Q8N3C7 705 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 CADM2Q8N3J6 435 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 FAM169BQ8N8A8 192 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms