RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 RNASE6Q93091 150 aaKnown RBP23.29■■□□□ 1.32
NME3-209ENST00000566600 KTI12Q96EK9 354 aaPredicted RBP23.29■■□□□ 1.32
NME3-209ENST00000566600 SLC41A3Q96GZ6 507 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 PSD2Q9BQI7 771 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 MUC13Q9H3R2 512 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 PLSCR4Q9NRQ2 329 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 CGAP01215 116 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 MSX2P35548 267 aaPredicted RBP23.28■■□□□ 1.32
NME3-209ENST00000566600 PEX19P40855 299 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 OTUD3Q5T2D3 398 aaPredicted RBP23.28■■□□□ 1.32
NME3-209ENST00000566600 TTC33Q6PID6 262 aaPredicted RBP23.28■■□□□ 1.32
NME3-209ENST00000566600 GDF7Q7Z4P5 450 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 TUSC5Q8IXB3 177 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 PRRC1Q96M27 445 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 PTDSS2Q9BVG9 487 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 SLC19A3Q9BZV2 496 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 RIMS3Q9UJD0 308 aa23.28■■□□□ 1.32
NME3-209ENST00000566600 IGKV3D-15A0A087WSY6 115 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 A8MXE2 369 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 FTCDNL1E5RQL4 147 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 GPR171O14626 319 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 GYG2O15488 501 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 LYPD3O95274 346 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 KLK2P20151 261 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 SLC16A1P53985 500 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 PIN1Q13526 163 aaPredicted RBP23.27■■□□□ 1.32
NME3-209ENST00000566600 LUZP2Q86TE4 346 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 STK32CQ86UX6 486 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 TSPYL5Q86VY4 417 aaPredicted RBP23.27■■□□□ 1.32
NME3-209ENST00000566600 TAAR8Q969N4 342 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 SLC25A36Q96CQ1 311 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 RBM24Q9BX46 236 aaKnown RBP23.27■■□□□ 1.32
NME3-209ENST00000566600 AMBRA1Q9C0C7 1298 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 NPDC1Q9NQX5 325 aaPredicted RBP23.27■■□□□ 1.32
NME3-209ENST00000566600 ACTR3BQ9P1U1 418 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 MPDZO75970 2070 aa23.27■■□□□ 1.32
NME3-209ENST00000566600 FLNBO75369 2602 aaKnown RBP23.26■■□□□ 1.31
NME3-209ENST00000566600 AQP7P3A6NL99 342 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 ZNF716A6NP11 495 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 C19orf84I3L1E1 186 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 FZD7O75084 574 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 AKR7A3O95154 331 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 VAMP5O95183 116 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 THY1P04216 161 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 UQCRC1P31930 480 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 ST3GAL3Q11203 375 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 CYP4Z1Q86W10 505 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 KIF18BQ86Y91 864 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 CCDC103Q8IW40 242 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 TMEM99Q8N816 258 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 SPOCK3Q9BQ16 436 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 ZNF426Q9BUY5 554 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 SF3B5Q9BWJ5 86 aaKnown RBP23.26■■□□□ 1.31
NME3-209ENST00000566600 ENKD1Q9H0I2 346 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 FANCFQ9NPI8 374 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 ING1Q9UK53 422 aaPredicted RBP23.26■■□□□ 1.31
NME3-209ENST00000566600 HCFC1P51610 2035 aa23.26■■□□□ 1.31
NME3-209ENST00000566600 ATP5HO75947 161 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 RBM34P42696 430 aaKnown RBP23.25■■□□□ 1.31
NME3-209ENST00000566600 PCYT1AP49585 367 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 RASSF2P50749 326 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 BNIP1Q12981 228 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 TRIM25Q14258 630 aaKnown RBP23.25■■□□□ 1.31
NME3-209ENST00000566600 MTX3Q5HYI7 312 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 TMEM225Q6GV28 225 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 GALNT5Q7Z7M9 940 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 P3H2Q8IVL5 708 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 PYURFQ96I23 114 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 HS6ST2Q96MM7 605 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 BTBD10Q9BSF8 475 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 THTPAQ9BU02 230 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 OPN3Q9H1Y3 402 aaPredicted RBP23.25■■□□□ 1.31
NME3-209ENST00000566600 SLC24A3Q9HC58 644 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 ELOVL5Q9NYP7 299 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 C6orf203Q9P0P8 240 aaPredicted RBP23.25■■□□□ 1.31
NME3-209ENST00000566600 A4GNTQ9UNA3 340 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 CORINQ9Y5Q5 1042 aa23.25■■□□□ 1.31
NME3-209ENST00000566600 ZNF814B7Z6K7 855 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 STAMBPO95630 424 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 MT-ATP6P00846 226 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 COX6B1P14854 86 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 COL8A1P27658 744 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 WDR88Q6ZMY6 472 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 C10orf53Q8N6V4 93 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 ZNF610Q8N9Z0 462 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 ACBD4Q8NC06 268 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 POP5Q969H6 163 aaKnown RBP23.24■■□□□ 1.31
NME3-209ENST00000566600 ZNF300Q96RE9 604 aaPredicted RBP23.24■■□□□ 1.31
NME3-209ENST00000566600 PRSS27Q9BQR3 290 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 FNDC11Q9BVV2 318 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 RASD1Q9Y272 281 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 B3GALT5Q9Y2C3 310 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 FAM32AQ9Y421 112 aaKnown RBP23.24■■□□□ 1.31
NME3-209ENST00000566600 ENPP4Q9Y6X5 453 aa23.24■■□□□ 1.31
NME3-209ENST00000566600 PDE5AO76074 875 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 IGFBP2P18065 325 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 SLC17A1Q14916 467 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 MEX3BQ6ZN04 569 aaKnown RBP23.23■■□□□ 1.31
NME3-209ENST00000566600 BEND4Q6ZU67 534 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 LSRQ86X29 649 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms