RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
CLN6-207ENST00000566347 GOLGA6L1Q8N7Z2 621 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 TMEM99Q8N816 258 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 OR9K2Q8NGE7 335 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 LRRC8CQ8TDW0 803 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 PAIP1Q9H074 479 aaKnown RBP17.73■□□□□ 0.43
CLN6-207ENST00000566347 BARX1Q9HBU1 254 aaPredicted RBP17.73■□□□□ 0.43
CLN6-207ENST00000566347 BCL2L10Q9HD36 194 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 A4GALTQ9NPC4 353 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 TCF7L2Q9NQB0 619 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 SLC7A10Q9NS82 523 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 POU2F3Q9UKI9 436 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 VAMP5O95183 116 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 CD8AP01732 235 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 BMP2P12643 396 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 CD40P25942 277 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 MPGP29372 298 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 FOXG1P55316 489 aaPredicted RBP17.72■□□□□ 0.43
CLN6-207ENST00000566347 PPP2R2BQ00005 443 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 TSPO2Q5TGU0 170 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 SLC2A7Q6PXP3 512 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 SLC22A25Q6T423 547 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 AAED1Q7RTV5 226 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 ABHD12BQ7Z5M8 362 aaPredicted RBP17.72■□□□□ 0.43
CLN6-207ENST00000566347 SERPINA11Q86U17 422 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 POMGNT2Q8NAT1 580 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 BBS10Q8TAM1 723 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 HS6ST2Q96MM7 605 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 SLCO5A1Q9H2Y9 848 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 AMDHD2Q9Y303 409 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 CHST2Q9Y4C5 530 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 JMJD1CQ15652 2540 aa17.72■□□□□ 0.43
CLN6-207ENST00000566347 A0A1W2PR80 420 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 C5orf58C9J3I9 102 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 IGHV4-39P01824 125 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 PRG2P13727 222 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 PCSK6P29122 969 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 BNIP2Q12982 314 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 NRF1Q16656 503 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 C1orf140Q5VVS0 124 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 TMEM225Q6GV28 225 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 GPAT4Q86UL3 456 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 ZIC4Q8N9L1 334 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 STK35Q8TDR2 534 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 C3orf49Q96BT1 292 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 DHRS9Q9BPW9 319 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 SLC17A5Q9NRA2 495 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 ADPRHL2Q9NX46 363 aa17.71■□□□□ 0.43
CLN6-207ENST00000566347 M0R1B8 84 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 FRS3O43559 492 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 NPIPB7O75200 414 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 NUDT7P0C024 238 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 HOXB9P17482 250 aaPredicted RBP17.7■□□□□ 0.42
CLN6-207ENST00000566347 PPIBP23284 216 aaKnown RBP17.7■□□□□ 0.42
CLN6-207ENST00000566347 TTKP33981 857 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 LRIF1Q5T3J3 769 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 C9orf135Q5VTT2 229 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 KLHL24Q6TFL4 600 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 WDR31Q8NA23 367 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 MAL2Q969L2 176 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 ZNF385AQ96PM9 386 aaKnown RBP17.7■□□□□ 0.42
CLN6-207ENST00000566347 CCDC28BQ9BUN5 200 aa17.7■□□□□ 0.42
CLN6-207ENST00000566347 HEATR1Q9H583 2144 aaKnown RBP17.69■□□□□ 0.42
CLN6-207ENST00000566347 OR6C65A6NJZ3 312 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 TMEM229AB2RXF0 380 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 E7EQL1 145 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 RNF223E7ERA6 249 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 AHSA1O95433 338 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 WNT11O96014 354 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 ETS2P15036 469 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 ACVR1BP36896 505 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 IDH3AP50213 366 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 P2RY4P51582 365 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 IRX1P78414 480 aaPredicted RBP17.69■□□□□ 0.42
CLN6-207ENST00000566347 SPOCK1Q08629 439 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 BLOC1S3Q6QNY0 202 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 LSRQ86X29 649 aaPredicted RBP17.69■□□□□ 0.42
CLN6-207ENST00000566347 FBXL14Q8N1E6 418 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 SPDL1Q96EA4 605 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 ADAD1Q96M93 576 aaKnown RBP17.69■□□□□ 0.42
CLN6-207ENST00000566347 REG4Q9BYZ8 158 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 FKRPQ9H9S5 495 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 SLCO1B3Q9NPD5 702 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 CBLN4Q9NTU7 201 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 TMEM45AQ9NWC5 275 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 RASD1Q9Y272 281 aa17.69■□□□□ 0.42
CLN6-207ENST00000566347 INAFM1C9JVW0 142 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 NR5A2O00482 541 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 KRT33AO76009 404 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 PRKAR1BP31321 381 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 PRPS1P60891 318 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 GCNT6Q5T4J0 391 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 ZNF544Q6NX49 715 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 DNM1P46Q6ZS02 220 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 KRT73Q86Y46 540 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 FUNDC1Q8IVP5 155 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 MUC15Q8N387 334 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 MFSD8Q8NHS3 518 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 BOD1Q96IK1 185 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 ATP6V1G3Q96LB4 118 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms