RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ACTBP60709 375 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ACTA2P62736 377 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ACTG1P63261 375 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ACTG2P63267 376 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ACTC1P68032 377 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ACTA1P68133 377 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 MRPS34P82930 218 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PRR5P85299 388 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 NHLH1Q02575 133 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 FADDQ13158 208 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 C6orf141Q5SZD1 244 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ANKRD34AQ69YU3 496 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 RBM44Q6ZP01 1051 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 OR2L3Q8NG85 312 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 OR13C3Q8NGS6 347 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 SKA2Q8WVK7 121 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PHF21AQ96BD5 680 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PRR25Q96S07 402 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 OSBPL11Q9BXB4 747 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 DPAGT1Q9H3H5 408 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF696Q9H7X3 374 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 AGPAT4Q9NRZ5 378 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ZNHIT2Q9UHR6 403 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 C3orf18Q9UK00 162 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 OR10H1Q9Y4A9 318 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 TNFRSF18Q9Y5U5 241 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 A0A1W2PS29 197 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 CCDC160A6NGH7 325 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 GNAO1P09471 354 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 GCSHP23434 173 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 HRH2P25021 359 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 FASP25445 335 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 KIR2DL1P43626 348 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 RPL5P46777 297 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 MRPL19P49406 292 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ATP1B3P54709 279 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 SNRPD1P62314 119 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 SLC7A9P82251 487 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 EMX2Q04743 252 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 GRIK2Q13002 908 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 MRPL49Q13405 166 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 C22orf39Q6P5X5 142 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 CARM1Q86X55 608 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 MEX3DQ86XN8 651 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 TMEM25Q86YD3 366 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PRSS33Q8NF86 280 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 TCEAL4Q96EI5 215 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 MRPS26Q9BYN8 205 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 RPF2Q9H7B2 306 aaKnown RBP9.66□□□□□ -0.86
UBFD1-205ENST00000566136 OAZ3Q9UMX2 235 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF106Q9H2Y7 1883 aaKnown RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 FAM240BA0A1B0GVZ2 78 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 SNTNA6NMZ2 147 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 NEDD8-MDP1E9PL57 170 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 E9PQ18 207 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 OR2J3O76001 311 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 NFATC1O95644 943 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 DANCRP0C864 163 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 CCR7P32248 378 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 GZMKP49863 264 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 TNFSF10P50591 281 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 PPT1P50897 306 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 TXNL4AP83876 142 aaKnown RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 GGTA1PQ4G0N0 100 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 BHLHA15Q7RTS1 189 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 CHPT1Q8WUD6 406 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 SEBOXQ9HB31 216 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 MRM2Q9UI43 246 aaKnown RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF346Q9UL40 294 aaKnown RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 PLXNB3Q9ULL4 1909 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 CACNA1HO95180 2353 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 YY2O15391 372 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 CLIC3O95833 236 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 PPP2CBP62714 309 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 PPP2CAP67775 309 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 DNASE1L3Q13609 305 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 APOFQ13790 326 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 TBR1Q16650 682 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 PYCR3Q53H96 274 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 TPRG1Q6ZUI0 275 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 SLC22A16Q86VW1 577 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 LIX1Q8N485 282 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 KRTCAP2Q8N6L1 136 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 DTD1Q8TEA8 209 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 BIRC7Q96CA5 298 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 LOXL4Q96JB6 756 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 VPS35Q96QK1 796 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 GPHA2Q96T91 129 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 DLL4Q9NR61 685 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 SMOXQ9NWM0 555 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF490Q9ULM2 529 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-205ENST00000566136 PIGLQ9Y2B2 252 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 RAXQ9Y2V3 346 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 SLCO1B1Q9Y6L6 691 aa9.65□□□□□ -0.86
UBFD1-205ENST00000566136 DENND4AQ7Z401 1863 aa9.65□□□□□ -0.87
UBFD1-205ENST00000566136 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
UBFD1-205ENST00000566136 LOC390937A0A1W2PQ73 354 aa9.64□□□□□ -0.87
UBFD1-205ENST00000566136 A0A1W2PRB8 838 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms