RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 DSCR9P59020 149 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 STX1BP61266 288 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 IRX1P78414 480 aaPredicted RBP13.18□□□□□ -0.3
SPG7-210ENST00000564409 CEACAM7Q14002 265 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 C6orf10Q5SRN2 563 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 ZNF544Q6NX49 715 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 ZNF836Q6ZNA1 936 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 AAED1Q7RTV5 226 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 VRK2Q86Y07 508 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 FBXL14Q8N1E6 418 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
SPG7-210ENST00000564409 OR9K2Q8NGE7 335 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 STK35Q8TDR2 534 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
SPG7-210ENST00000564409 MOV10Q9HCE1 1003 aaKnown RBP13.18□□□□□ -0.3
SPG7-210ENST00000564409 OBP2BQ9NPH6 170 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 SLC17A5Q9NRA2 495 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 SLC7A10Q9NS82 523 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 CBLN4Q9NTU7 201 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 POU2F3Q9UKI9 436 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 IGHV4-39P01824 125 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 NCF2P19878 526 aaPredicted RBP13.17□□□□□ -0.3
SPG7-210ENST00000564409 PCSK6P29122 969 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 ACVR1BP36896 505 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 PRPS1P60891 318 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 RGNQ15493 299 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 OR7A5Q15622 319 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 TSPO2Q5TGU0 170 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 KLHL24Q6TFL4 600 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 EPGNQ6UW88 154 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 MAVSQ7Z434 540 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 CADM2Q8N3J6 435 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 GOLGA6L1Q8N7Z2 621 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 TMEM99Q8N816 258 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 GTF2H4Q92759 462 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 TMEM19Q96HH6 336 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 C7orf26Q96N11 449 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 OR52B2Q96RD2 323 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 C12orf10Q9HB07 376 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 A4GALTQ9NPC4 353 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 RASD1Q9Y272 281 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 PCDHB14Q9Y5E9 798 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 USH1CQ9Y6N9 552 aa13.17□□□□□ -0.3
SPG7-210ENST00000564409 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 E7EQL1 145 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 CLIC1O00299 241 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 TLX2O43763 284 aaPredicted RBP13.16□□□□□ -0.3
SPG7-210ENST00000564409 NPIPB7O75200 414 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 AKR7A3O95154 331 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
SPG7-210ENST00000564409 ETS2P15036 469 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
SPG7-210ENST00000564409 CHRNB3Q05901 458 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 DMTNQ08495 405 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 ZNF311Q5JNZ3 666 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 BEND6Q5SZJ8 279 aaPredicted RBP13.16□□□□□ -0.3
SPG7-210ENST00000564409 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 C1orf140Q5VVS0 124 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 C11orf71Q6IPW1 123 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 MUC15Q8N387 334 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 ZIC4Q8N9L1 334 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 MFSD8Q8NHS3 518 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 VPS33AQ96AX1 596 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 RHNO1Q9BSD3 238 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 B3GALT5Q9Y2C3 310 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
SPG7-210ENST00000564409 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 C5orf58C9J3I9 102 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 H7C417 338 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 M0R1B8 84 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 POLR3GO15318 223 aaPredicted RBP13.15□□□□□ -0.3
SPG7-210ENST00000564409 FRS3O43559 492 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 KRT33AO76009 404 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 AHSA1O95433 338 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 C6orf89Q6UWU4 347 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 GPAT4Q86UL3 456 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 C3orf49Q96BT1 292 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 AURKBQ96GD4 344 aaPredicted RBP13.15□□□□□ -0.3
SPG7-210ENST00000564409 CCDC28BQ9BUN5 200 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 PAIP1Q9H074 479 aaKnown RBP13.15□□□□□ -0.3
SPG7-210ENST00000564409 TCF7L2Q9NQB0 619 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 ADPRHL2Q9NX46 363 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 CORO2BQ9UQ03 480 aa13.15□□□□□ -0.3
SPG7-210ENST00000564409 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 ZNF587BE7ETH6 402 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 OR2T1O43869 369 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms