RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SLC22A25Q6T423 547 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 KLHL17Q6TDP4 642 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 AAED1Q7RTV5 226 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 OR9K2Q8NGE7 335 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 THOC1Q96FV9 657 aaKnown RBP15.55■□□□□ 0.08
NME3-205ENST00000563854 RPS6KB2Q9UBS0 482 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.55■□□□□ 0.08
NME3-205ENST00000563854 CHST2Q9Y4C5 530 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 SLC25A15Q9Y619 301 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 USF3Q68DE3 2245 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 AQP7P3A6NL99 342 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 KRT33AO76009 404 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 AHSA1O95433 338 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 TNK1Q13470 666 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 ZSWIM7Q19AV6 140 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 CLEC12BQ2HXU8 276 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 AGKQ53H12 422 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 C1orf140Q5VVS0 124 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 TMEM225Q6GV28 225 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 OR7E24Q6IFN5 339 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 SSX8Q7RTT4 187 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 FUNDC1Q8IVP5 155 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 C3orf49Q96BT1 292 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 SLC25A36Q96CQ1 311 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 ZNF385AQ96PM9 386 aaKnown RBP15.54■□□□□ 0.08
NME3-205ENST00000563854 CCDC28BQ9BUN5 200 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 FAIMQ9NVQ4 179 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 SLC25A37Q9NYZ2 338 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 SLAMF8Q9P0V8 285 aa15.54■□□□□ 0.08
NME3-205ENST00000563854 OVOL3O00110 214 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 HOXB9P17482 250 aaPredicted RBP15.53■□□□□ 0.08
NME3-205ENST00000563854 GTF2E2P29084 291 aaKnown RBP15.53■□□□□ 0.08
NME3-205ENST00000563854 PAGE3Q5JUK9 113 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 PRAMEF8Q5VWM4 474 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 PRAMEF7Q5VXH5 474 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 BLOC1S3Q6QNY0 202 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 KLHL24Q6TFL4 600 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 MSRB3Q8IXL7 192 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 MAPK1IP1LQ8NDC0 245 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 TMEM45BQ96B21 275 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 HS6ST2Q96MM7 605 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 TRAF4Q9BUZ4 470 aaPredicted RBP15.53■□□□□ 0.08
NME3-205ENST00000563854 SLCO5A1Q9H2Y9 848 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 BCL2L10Q9HD36 194 aa15.53■□□□□ 0.08
NME3-205ENST00000563854 INTS9Q9NV88 658 aaKnown RBP15.53■□□□□ 0.08
NME3-205ENST00000563854 ELOA3DA6NLF2 546 aaPredicted RBP15.52■□□□□ 0.08
NME3-205ENST00000563854 RNF223E7ERA6 249 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 NDUFS7O75251 213 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 ARAFP10398 606 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 PTAFRP25105 342 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 CD40P25942 277 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 ACVR1BP36896 505 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 RPS5P46782 204 aaKnown RBP15.52■□□□□ 0.08
NME3-205ENST00000563854 MRPL19P49406 292 aaKnown RBP15.52■□□□□ 0.08
NME3-205ENST00000563854 TGFBR3Q03167 851 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 SQLEQ14534 574 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 ELOA3BQ3SY89 546 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 LRIF1Q5T3J3 769 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 DEPDC4Q8N2C3 294 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 C10orf111Q8N326 155 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 ZIC4Q8N9L1 334 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 ELOA3Q8NG57 546 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 RNF217Q8TC41 542 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 MUS81Q96NY9 551 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 SF3B5Q9BWJ5 86 aaKnown RBP15.52■□□□□ 0.08
NME3-205ENST00000563854 SLC17A5Q9NRA2 495 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 VAPAQ9P0L0 249 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 DCTN4Q9UJW0 460 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 GDF2Q9UK05 429 aaPredicted RBP15.52■□□□□ 0.08
NME3-205ENST00000563854 MGAT4BQ9UQ53 548 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 AMDHD2Q9Y303 409 aa15.52■□□□□ 0.08
NME3-205ENST00000563854 TMEM229AB2RXF0 380 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 PDLIM1O00151 329 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 IGHV4-39P01824 125 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 BMP2P12643 396 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 PPIBP23284 216 aaKnown RBP15.51■□□□□ 0.07
NME3-205ENST00000563854 MPGP29372 298 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 AQP1P29972 269 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 NCALDP61601 193 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 SLC25A3Q00325 362 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 CDK6Q00534 326 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 IL1RL1Q01638 556 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 LGALS3BPQ08380 585 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 AGAP6Q5VW22 663 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 NIPAL3Q6P499 406 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 KRT73Q86Y46 540 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 WDR31Q8NA23 367 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 POMGNT2Q8NAT1 580 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 RADILQ96JH8 1075 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 ALKBH3Q96Q83 286 aaPredicted RBP15.51■□□□□ 0.07
NME3-205ENST00000563854 ATP23Q9Y6H3 246 aa15.51■□□□□ 0.07
NME3-205ENST00000563854 E7EQL1 145 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 CD8AP01732 235 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 ETS2P15036 469 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 PRKAR1BP31321 381 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 SELENOPP49908 381 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 FABP6P51161 128 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 PPP2R2BQ00005 443 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 SCARB2Q14108 478 aa15.5■□□□□ 0.07
NME3-205ENST00000563854 ETFDHQ16134 617 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms