RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 POLR2JP52435 117 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 COPZ1P61923 177 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 TGFBR3Q03167 851 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 CEACAM7Q14002 265 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 LARS2Q15031 903 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 GTDC1Q4AE62 458 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 ZNF544Q6NX49 715 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 CLIP4Q8N3C7 705 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 TMEM99Q8N816 258 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 POMGNT2Q8NAT1 580 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 OR9K2Q8NGE7 335 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 GTF2H4Q92759 462 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 HS6ST2Q96MM7 605 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 ARMC7Q9H6L4 198 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 UPB1Q9UBR1 384 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 GDF2Q9UK05 429 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 ZNF232Q9UNY5 417 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 IFT52Q9Y366 437 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 TMEM229AB2RXF0 380 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 AKR7A3O95154 331 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 RGNQ15493 299 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 OR7A5Q15622 319 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 BEND6Q5SZJ8 279 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 SLC22A25Q6T423 547 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 EPGNQ6UW88 154 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 B3GLCTQ6Y288 498 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 DEPDC4Q8N2C3 294 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 MIER2Q8N344 545 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 OR9I1Q8NGQ6 314 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 STK35Q8TDR2 534 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 VPS33AQ96AX1 596 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 AURKBQ96GD4 344 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 TMEM19Q96HH6 336 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 ADAD1Q96M93 576 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 ZNF385AQ96PM9 386 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 PAIP1Q9H074 479 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 A4GALTQ9NPC4 353 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 GMEB1Q9Y692 573 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 FBN3Q75N90 2809 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 PLCE1Q9P212 2302 aa15.09■□□□□ 0.01
VPS9D1-203ENST00000563798 A0A1W2PR80 420 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 TMEM247A6NEH6 219 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 H7C417 338 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 FRS3O43559 492 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 PRG2P13727 222 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 PAX7P23759 505 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 IRX1P78414 480 aaPredicted RBP15.08■□□□□ 0
VPS9D1-203ENST00000563798 SLC25A3Q00325 362 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 DMTNQ08495 405 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 SPOCK1Q08629 439 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 FADDQ13158 208 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 C1orf140Q5VVS0 124 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 AAED1Q7RTV5 226 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 MUC15Q8N387 334 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 CADM2Q8N3J6 435 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 OR10H5Q8NGA6 315 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 C3orf49Q96BT1 292 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 C7orf26Q96N11 449 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 TAPBPLQ9BX59 468 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 RAD21L1Q9H4I0 556 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 OBP2BQ9NPH6 170 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 PCDHB14Q9Y5E9 798 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 USH1CQ9Y6N9 552 aa15.08■□□□□ 0
VPS9D1-203ENST00000563798 A0A096LNT2 108 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 OR6C65A6NJZ3 312 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 KIAA1324LA8MWY0 1029 aaPredicted RBP15.07■□□□□ 0
VPS9D1-203ENST00000563798 FTCDNL1E5RQL4 147 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 M0R1B8 84 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 CLIC1O00299 241 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 TLX2O43763 284 aaPredicted RBP15.07■□□□□ 0
VPS9D1-203ENST00000563798 ERLIN1O75477 346 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 TGDSO95455 350 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 DSCR9P59020 149 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 PRPS1P60891 318 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 BNIP2Q12982 314 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 RPS26P11Q5JNZ5 115 aaPredicted RBP15.07■□□□□ 0
VPS9D1-203ENST00000563798 C6orf10Q5SRN2 563 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 LRIF1Q5T3J3 769 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 TMEM225Q6GV28 225 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 C6orf89Q6UWU4 347 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 CREB3L2Q70SY1 520 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 ABHD12BQ7Z5M8 362 aaPredicted RBP15.07■□□□□ 0
VPS9D1-203ENST00000563798 SERPINA11Q86U17 422 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 LSRQ86X29 649 aaPredicted RBP15.07■□□□□ 0
VPS9D1-203ENST00000563798 FBXL14Q8N1E6 418 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 MFSD8Q8NHS3 518 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 BBS10Q8TAM1 723 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 ZNF317Q96PQ6 595 aaPredicted RBP15.07■□□□□ 0
VPS9D1-203ENST00000563798 CACNG6Q9BXT2 260 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 FKRPQ9H9S5 495 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 C12orf10Q9HB07 376 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 TMEM45AQ9NWC5 275 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 POU2F3Q9UKI9 436 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 ADAM21Q9UKJ8 722 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 RASD1Q9Y272 281 aa15.07■□□□□ 0
VPS9D1-203ENST00000563798 CR1P17927 2039 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 CD5LO43866 347 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 WNT11O96014 354 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 NUDT7P0C024 238 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms