RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
USB1-207ENST00000563149 NOX4Q9NPH5 578 aa12□□□□□ -0.49
USB1-207ENST00000563149 EVA1BQ9NVM1 165 aa12□□□□□ -0.49
USB1-207ENST00000563149 KLHL9Q9P2J3 617 aa12□□□□□ -0.49
USB1-207ENST00000563149 CLEC4AQ9UMR7 237 aa12□□□□□ -0.49
USB1-207ENST00000563149 A0A1W2PPK0 400 aa12□□□□□ -0.49
USB1-207ENST00000563149 OR5K4A6NMS3 321 aa12□□□□□ -0.49
USB1-207ENST00000563149 IFITM5A6NNB3 132 aa12□□□□□ -0.49
USB1-207ENST00000563149 KRT33AO76009 404 aa12□□□□□ -0.49
USB1-207ENST00000563149 OR7A10O76100 309 aa12□□□□□ -0.49
USB1-207ENST00000563149 IFNA7P01567 189 aa12□□□□□ -0.49
USB1-207ENST00000563149 IGKV1D-16P01601 117 aa12□□□□□ -0.49
USB1-207ENST00000563149 MT-ND4P03905 459 aa12□□□□□ -0.49
USB1-207ENST00000563149 IFNA16P05015 189 aa12□□□□□ -0.49
USB1-207ENST00000563149 TACSTD2P09758 323 aa12□□□□□ -0.49
USB1-207ENST00000563149 ANKRD34CP0C6C1 535 aa12□□□□□ -0.49
USB1-207ENST00000563149 CXCL3P19876 107 aa12□□□□□ -0.49
USB1-207ENST00000563149 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
USB1-207ENST00000563149 COL9A1P20849 921 aa12□□□□□ -0.49
USB1-207ENST00000563149 RPL4P36578 427 aaKnown RBP12□□□□□ -0.49
USB1-207ENST00000563149 NAA10P41227 235 aaPredicted RBP12□□□□□ -0.49
USB1-207ENST00000563149 METTL11BQ5VVY1 283 aa12□□□□□ -0.49
USB1-207ENST00000563149 SIGIRRQ6IA17 410 aa12□□□□□ -0.49
USB1-207ENST00000563149 FAM199XQ6PEV8 388 aaPredicted RBP12□□□□□ -0.49
USB1-207ENST00000563149 HDDC2Q7Z4H3 204 aa12□□□□□ -0.49
USB1-207ENST00000563149 TIGD4Q8IY51 512 aa12□□□□□ -0.49
USB1-207ENST00000563149 OR6V1Q8N148 313 aa12□□□□□ -0.49
USB1-207ENST00000563149 OR11H4Q8NGC9 324 aa12□□□□□ -0.49
USB1-207ENST00000563149 SUN5Q8TC36 379 aa12□□□□□ -0.49
USB1-207ENST00000563149 OIT3Q8WWZ8 545 aa12□□□□□ -0.49
USB1-207ENST00000563149 LCORQ96JN0 433 aaPredicted RBP12□□□□□ -0.49
USB1-207ENST00000563149 VSTM2LQ96N03 204 aa12□□□□□ -0.49
USB1-207ENST00000563149 CLEC4MQ9H2X3 399 aaPredicted RBP12□□□□□ -0.49
USB1-207ENST00000563149 HEXA-AS1Q9H8Q6 139 aa12□□□□□ -0.49
USB1-207ENST00000563149 HRASLSQ9HDD0 168 aa12□□□□□ -0.49
USB1-207ENST00000563149 Q9N2J8 555 aa12□□□□□ -0.49
USB1-207ENST00000563149 HRASLS2Q9NWW9 162 aa12□□□□□ -0.49
USB1-207ENST00000563149 MOKQ9UQ07 419 aa12□□□□□ -0.49
USB1-207ENST00000563149 SLC6A5Q9Y345 797 aa12□□□□□ -0.49
USB1-207ENST00000563149 MYO7AQ13402 2215 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 A0A0B4J203 849 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 KIR2DS5A0A0G2JLQ3 304 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 A0A0G2JNG1 304 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 H0Y8X5 98 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 KIR2DS3K7RE56 304 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 SSNA1O43805 119 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 LDOC1O95751 146 aaPredicted RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 APEHP13798 732 aaKnown RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 PVRP15151 417 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 PSMB1P20618 241 aaKnown RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 C4BPBP20851 252 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 DPP4P27487 766 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 UQCRC1P31930 480 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 VSX2P58304 361 aaPredicted RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 RPS4XP62701 263 aaKnown RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 UBE2IP63279 158 aaKnown RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 DBPQ10586 325 aaPredicted RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 KIR2DS5Q14953 304 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 ALG11Q2TAA5 492 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 RNASE12Q5GAN4 147 aaKnown RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 FAM209AQ5JX71 171 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 SEZ6L2Q6UXD5 910 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 DGAT2L6Q6ZPD8 337 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 LINGO2Q7L985 606 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 PRSS45Q7RTY3 260 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 OOSP2Q86WS3 158 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 LIPHQ8WWY8 451 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 HSPA12BQ96MM6 686 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 ZNF578Q96N58 590 aaPredicted RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 CCDC3Q9BQI4 270 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 ZNF436Q9C0F3 470 aaPredicted RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 SPRTNQ9H040 489 aaPredicted RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 CPNE7Q9UBL6 633 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 EIF3KQ9UBQ5 218 aaKnown RBP11.99□□□□□ -0.49
USB1-207ENST00000563149 FBXL3Q9UKT7 428 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 COPS3Q9UNS2 423 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 HS3ST3A1Q9Y663 406 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 V9GY05 133 aa11.99□□□□□ -0.49
USB1-207ENST00000563149 A0A1B0GUH1 482 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 SERINC4A6NH21 518 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 TUBAL3A6NHL2 446 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 IMPA2O14732 288 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 PIN1P1O15428 100 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 PRAMEF2O60811 474 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 TNFP01375 233 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 CA3P07451 260 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 MAPK3P27361 379 aaPredicted RBP11.98□□□□□ -0.49
USB1-207ENST00000563149 AKT2P31751 481 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 SLC25A1P53007 311 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 SCAND1P57086 179 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 SKP1P63208 163 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 IGLV3-21P80748 117 aaPredicted RBP11.98□□□□□ -0.49
USB1-207ENST00000563149 LGALSLQ3ZCW2 172 aaPredicted RBP11.98□□□□□ -0.49
USB1-207ENST00000563149 CLLU1Q5K131 121 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 ZNF684Q5T5D7 378 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 OLFML2AQ68BL7 652 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 FBXO46Q6PJ61 603 aaPredicted RBP11.98□□□□□ -0.49
USB1-207ENST00000563149 PARM1Q6UWI2 310 aa11.98□□□□□ -0.49
USB1-207ENST00000563149 SYT9Q86SS6 491 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms