RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ERVK-6Q9BXR3 956 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 GSDMCQ9BYG8 508 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 POLE3Q9NRF9 147 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 RMND1Q9NWS8 449 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 TAS2R16Q9NYV7 291 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CTSZQ9UBR2 303 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 PISDQ9UG56 409 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 STAP1Q9ULZ2 295 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 HPCAL4Q9UM19 191 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 CLCA3PQ9Y6N3 262 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 COL5A1P20908 1838 aaPredicted RBP3.02□□□□□ -1.93
HERC1-215ENST00000561436 FRYLO94915 3013 aa3.02□□□□□ -1.93
HERC1-215ENST00000561436 FREM2Q5SZK8 3169 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 WDR87Q6ZQQ6 2873 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 TRBV5-4A0A0C4DH59 114 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 A0A0J9YVX5 310 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 A0A1B0GTH9 108 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 A0A1B0GU03 582 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 TSPAN11A1L157 253 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 TRIM49BA6NDI0 452 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 EFCAB7A8K855 629 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 C21orf140B9A014 251 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 M0QYV0 167 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 RAD1O60671 282 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ZMPSTE24O75844 475 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 NEBLO76041 1014 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SNRPCP09234 159 aaKnown RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 RRASP10301 218 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SELEP16581 610 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 DESP17661 470 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 PRDX6P30041 224 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 OR1E1P30953 314 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 UGT1A3P35503 534 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 STK19P49842 368 aaPredicted RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 ATP4BP51164 291 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 AIF1P55008 147 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 MTTPP55157 894 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 GNA12Q03113 381 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SRYQ05066 204 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 GABPB1Q06547 395 aaPredicted RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 CDC20Q12834 499 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 DPYSQ14117 519 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SIX1Q15475 284 aaPredicted RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 FCN2Q15485 313 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 TGIF1Q15583 401 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 PARP6Q2NL67 630 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SLC25A52Q3SY17 297 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 VWA2Q5GFL6 755 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 LIPKQ5VXJ0 399 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 EMBQ6PCB8 327 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 PAQR6Q6TCH4 344 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ARSKQ6UWY0 536 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 APOOLQ6UXV4 268 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ZNF841Q6ZN19 808 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 TMEM26Q6ZUK4 368 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SYVN1Q86TM6 617 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ZNF683Q8IZ20 524 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 OR2AP1Q8NGE2 309 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 OR56A4Q8NGH8 313 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 OR4F5Q8NH21 305 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 UBA3Q8TBC4 463 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 GIPC3Q8TF64 312 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 HTR3CQ8WXA8 447 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 RASL10AQ92737 203 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 P3H4Q92791 437 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 NCLNQ969V3 563 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 GSDMAQ96QA5 445 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 CPXM1Q96SM3 734 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 VGLL1Q99990 258 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 APOOQ9BUR5 198 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 RAB11FIP5Q9BXF6 653 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 NLNQ9BYT8 704 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 TRIM4Q9C037 500 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ZYG11BQ9C0D3 744 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 EGLN1Q9GZT9 426 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 GPN2Q9H9Y4 310 aaPredicted RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 UCK1Q9HA47 277 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ROPN1Q9HAT0 212 aaPredicted RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 DDIT4Q9NX09 232 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SOHLH2Q9NX45 425 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SLC39A1Q9NY26 324 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 CNOT2Q9NZN8 540 aaKnown RBP3.01□□□□□ -1.93
HERC1-215ENST00000561436 MIOXQ9UGB7 285 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 IL20RAQ9UHF4 553 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 IKZF3Q9UKT9 509 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 SPATA2Q9UM82 520 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 AURKCQ9UQB9 309 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 FBXO7Q9Y3I1 522 aa3.01□□□□□ -1.93
HERC1-215ENST00000561436 ZZEF1O43149 2961 aa3□□□□□ -1.93
HERC1-215ENST00000561436 GREB1Q4ZG55 1949 aa3□□□□□ -1.93
HERC1-215ENST00000561436 IGHV5-10-1A0A0J9YXX1 117 aa3□□□□□ -1.93
HERC1-215ENST00000561436 TEX48A0A1B0GUV7 120 aa3□□□□□ -1.93
HERC1-215ENST00000561436 OR5K4A6NMS3 321 aa3□□□□□ -1.93
HERC1-215ENST00000561436 K7EQG2 157 aa3□□□□□ -1.93
HERC1-215ENST00000561436 PSMD11O00231 422 aa3□□□□□ -1.93
HERC1-215ENST00000561436 RAD51BO15315 384 aa3□□□□□ -1.93
HERC1-215ENST00000561436 KDELR3O43731 214 aa3□□□□□ -1.93
HERC1-215ENST00000561436 DPM1O60762 260 aa3□□□□□ -1.93
HERC1-215ENST00000561436 FGFR1OPO95684 399 aaKnown RBP3□□□□□ -1.93
HERC1-215ENST00000561436 LSM8O95777 96 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms