RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 HAS2Q92819 552 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 FAM46BQ96A09 425 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SCRN2Q96FV2 425 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 LRR1Q96L50 414 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SGK494Q96LW2 274 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 C17orf77Q96MU5 243 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 RAB40CQ96S21 281 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PELOQ9BRX2 385 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 BTBD10Q9BSF8 475 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 MED10Q9BTT4 135 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 GTPBP2Q9BX10 602 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 DGCR6LQ9BY27 220 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 DUSP16Q9BY84 665 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PARD6GQ9BYG4 376 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PRRG4Q9BZD6 226 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PRRG3Q9BZD7 231 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 STRADBQ9C0K7 418 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 WWTR1Q9GZV5 400 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 LINC00597Q9H2U6 94 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SAV1Q9H4B6 383 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ATP13A3Q9H7F0 1226 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CCNB1IP1Q9NPC3 277 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SIX2Q9NPC8 291 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 DUS2Q9NX74 493 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 MS4A12Q9NXJ0 267 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 RDH8Q9NYR8 311 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 NDUFA13Q9P0J0 144 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 B3GAT1Q9P2W7 334 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PISDQ9UG56 409 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CLEC2DQ9UHP7 191 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 RNF150Q9ULK6 438 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SCML2Q9UQR0 700 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 OR10H1Q9Y4A9 318 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CPQQ9Y646 472 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CACNG2Q9Y698 323 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 R4GN57 208 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ZFHX2Q9C0A1 2572 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 MYO10Q9HD67 2058 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PIEZO1Q92508 2521 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 FANCMQ8IYD8 2048 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MUC22E2RYF6 1773 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 A0A0A6YYH2 397 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 A6NJ64 397 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 C9JVG2 144 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SCAMP2O15127 329 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 DUX1O43812 170 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 BCAS1O75363 584 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 GPX5O75715 221 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ACSL3O95573 720 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MT-ND2P03891 347 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 PAEPP09466 180 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 RAB40ALP0C0E4 278 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ANKRD34CP0C6C1 535 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SMIM18P0DKX4 95 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 DBTP11182 482 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MBL2P11226 248 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 FGF5P12034 268 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 IL12BP29460 328 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ARRB1P49407 418 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 RGS7P49802 495 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CEBPGP53567 150 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 POLR2LP62875 67 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CCZ1BP86790 482 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CCZ1P86791 482 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 BDH1Q02338 343 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SLC34A1Q06495 639 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 BST2Q10589 180 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 PNRC1Q12796 327 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CDH17Q12864 832 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SLAMF1Q13291 335 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 GK2Q14410 553 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CAPRIN1Q14444 709 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 TGFBIQ15582 683 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 VAMP3Q15836 100 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CARTPTQ16568 116 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 GOLGA7BQ2TAP0 167 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 STPG1Q5TH74 334 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ASPHD2Q6ICH7 369 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 PYHIN1Q6K0P9 492 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 NEPROQ6NW34 567 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 NIPAL3Q6P499 406 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 LCLAT1Q6UWP7 414 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 Q6ZPB1 254 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SLC16A9Q7RTY1 509 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 C16orf62Q7Z3J2 963 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ERASQ7Z444 233 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 NFE4Q86UQ8 179 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 PIGZQ86VD9 579 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 VSTM4Q8IW00 320 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 BBS7Q8IWZ6 715 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 C10orf67Q8IYJ2 551 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MCOLN2Q8IZK6 566 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SPEM1Q8N4L4 309 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 TBC1D19Q8N5T2 526 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MLKLQ8NB16 471 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 SIDT2Q8NBJ9 832 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 OR1J1Q8NGS3 322 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 IRGQQ8WZA9 623 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 RFT1Q96AA3 541 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms