RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SNAPC5O75971 98 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 RASGRP1O95267 797 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 FLT3LGP49771 235 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 OR1Q1Q15612 314 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 HYAL4Q2M3T9 481 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 SLC6A19Q695T7 634 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 CDK20Q8IZL9 346 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 ACOT4Q8N9L9 421 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 OR2L2Q8NH16 312 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
TPM1-228ENST00000560975 DUSP19Q8WTR2 217 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 TCEAL4Q96EI5 215 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 ZNF75AQ96N20 296 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 WDR13Q9H1Z4 485 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 COA4Q9NYJ1 87 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 ADAM29Q9UKF5 820 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 SIGLEC7Q9Y286 467 aa15.18■□□□□ 0.02
TPM1-228ENST00000560975 A0A1B0GW55 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4L2P0CJ85 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4L3P0CJ86 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4L4P0CJ87 422 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4L5P0CJ88 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4L6P0CJ89 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4L7P0CJ90 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 F3P13726 295 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 ITPKBP27987 946 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 LUMP51884 338 aaPredicted RBP15.17■□□□□ 0.02
TPM1-228ENST00000560975 HFEQ30201 348 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 ZNF546Q86UE3 836 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 ZNF764Q96H86 408 aaPredicted RBP15.17■□□□□ 0.02
TPM1-228ENST00000560975 IGSF21Q96ID5 467 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 TNFRSF13CQ96RJ3 184 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 ACTRT3Q9BYD9 372 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DPEP2Q9H4A9 486 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 EPHX3Q9H6B9 360 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 STARD7Q9NQZ5 370 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 DUX4Q9UBX2 424 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 NDRG3Q9UGV2 375 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 LHX6Q9UPM6 363 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 V9GY05 133 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 ELNP15502 786 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 NDUFS1P28331 727 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 MPIP34949 423 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 SOX2P48431 317 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 KRT33BQ14525 404 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 RBMS2Q15434 407 aaKnown RBP15.17■□□□□ 0.02
TPM1-228ENST00000560975 GUCA2BQ16661 112 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 RANBP3LQ86VV4 465 aaPredicted RBP15.17■□□□□ 0.02
TPM1-228ENST00000560975 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
TPM1-228ENST00000560975 OR8S1Q8NH09 359 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 TSPAN10Q9H1Z9 355 aaPredicted RBP15.17■□□□□ 0.02
TPM1-228ENST00000560975 RASL12Q9NYN1 266 aa15.17■□□□□ 0.02
TPM1-228ENST00000560975 A0A1W2PPV9 198 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 ZNF254O75437 659 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 PVALBP20472 110 aaPredicted RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 RAB13P51153 203 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 UBE2IP63279 158 aaKnown RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 TNFRSF17Q02223 184 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 ATXN7L3Q14CW9 347 aaPredicted RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 LRRC37A5PQ49AS3 106 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 MRM1Q6IN84 353 aaKnown RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 LDLRAD3Q86YD5 345 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 PUSL1Q8N0Z8 303 aaKnown RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 ZFP82Q8N141 532 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 OR51S1Q8NGJ8 323 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 DVL3Q92997 716 aaPredicted RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 UTP23Q9BRU9 249 aaKnown RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 SCN2AQ99250 2005 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 HIST1H1TP22492 207 aaPredicted RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 TRA2BP62995 288 aaKnown RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 GUCA2AQ02747 115 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 RPL22L1Q6P5R6 122 aaKnown RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 SLC35F2Q8IXU6 374 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 NUS1Q96E22 293 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 IL21RQ9HBE5 538 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 BARX1Q9HBU1 254 aaPredicted RBP15.16■□□□□ 0.02
TPM1-228ENST00000560975 C2orf42Q9NWW7 574 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 PLEKHM1Q9Y4G2 1056 aa15.16■□□□□ 0.02
TPM1-228ENST00000560975 IMPA2O14732 288 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 PRKAR2AP13861 404 aaKnown RBP15.15■□□□□ 0.02
TPM1-228ENST00000560975 RPA2P15927 270 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 CNR1P21554 472 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 MEOX2P50222 304 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 DENND4AQ7Z401 1863 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 EID2Q8N6I1 236 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 LINC00469Q8N7U9 141 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 LINC01555Q8NAE3 123 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 HAVCR1Q96D42 359 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 MNTQ99583 582 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 SLC46A2Q9BY10 475 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 MTHFD2LQ9H903 347 aaPredicted RBP15.15■□□□□ 0.02
TPM1-228ENST00000560975 IGKV1-8A0A0C4DH67 115 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 RBBP9O75884 186 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 PAPLNO95428 1278 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 SYN1P17600 705 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 BCL6P41182 706 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 MAMSTRQ6ZN01 415 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 GLB1L2Q8IW92 636 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 PM20D2Q8IYS1 436 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 OR7G2Q8NG99 324 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms