RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 RNF14Q9UBS8 474 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 BLOC1S6Q9UL45 172 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 SNX6Q9UNH7 406 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 UGT2A1Q9Y4X1 527 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 ABCC11Q96J66 1382 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 PTPRGP23470 1445 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 DAPK1P53355 1430 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 PZPP20742 1482 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 EIF4G3O43432 1585 aaKnown RBP3.32□□□□□ -1.88
CRNDE-208ENST00000560029 NESP48681 1621 aa3.32□□□□□ -1.88
CRNDE-208ENST00000560029 PPRC1Q5VV67 1664 aaKnown RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ARHGEF11O15085 1522 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ABCA10Q8WWZ4 1543 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 KIAA0586Q9BVV6 1533 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 MYOM2P54296 1465 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 KDRP35968 1356 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 EVC2Q86UK5 1308 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 A0A1B0GUS0 222 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ERICH2A1L162 156 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 LRP5LA4QPB2 252 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 VPS37CA5D8V6 355 aaPredicted RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 NDUFAB1O14561 156 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 NDC80O14777 642 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 LIN7AO14910 233 aaPredicted RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 SMIM24O75264 130 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 BBOX1O75936 387 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 RPSAP08865 295 aaKnown RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 IQCF3P0C7M6 154 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 HNF1AP20823 631 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CD1BP29016 333 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 YWHABP31946 246 aaKnown RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 APOC4P55056 127 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 HSD17B7P56937 341 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 GNGT1P63211 74 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 WHAMMP3Q1A5X7 153 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 TTC23Q5W5X9 447 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CCDC80Q76M96 950 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CLEC4FQ8N1N0 589 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 TEX9Q8N6V9 391 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF740Q8NDX6 193 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 OR8K1Q8NGG5 319 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 OR1F12Q8NHA8 337 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 SENP8Q96LD8 212 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CFAP53Q96M91 514 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ERP44Q9BS26 406 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CAPS2Q9BXY5 557 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 TSGA10Q9BZW7 698 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 YIPF3Q9GZM5 350 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CLSTN2Q9H4D0 955 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 VCPKMTQ9H867 229 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 SH2D2AQ9NP31 389 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ZNHIT6Q9NWK9 470 aaKnown RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 EPS15L1Q9UBC2 864 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 TBK1Q9UHD2 729 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 PHF11Q9UIL8 331 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 RASD1Q9Y272 281 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 MRPS33Q9Y291 106 aaKnown RBP3.31□□□□□ -1.88
CRNDE-208ENST00000560029 ATP6V0A2Q9Y487 856 aa3.31□□□□□ -1.88
CRNDE-208ENST00000560029 CDC42BPAQ5VT25 1732 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 MYO5CQ9NQX4 1742 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 KDM5AP29375 1690 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ATAD2BQ9ULI0 1458 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 SSH2Q76I76 1423 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CDHR2Q9BYE9 1310 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 WI2-2373I1.2A0A1W2PRP0 233 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 GOLGA8KD6RF30 607 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 K7EQM0 130 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 TAPBPO15533 448 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 OR10H3O60404 316 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 SHOX2O60902 331 aaPredicted RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 N4BP1O75113 896 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 E2F6O75461 281 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF189O75820 626 aaPredicted RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 KRT6AP02538 564 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 SYT1P21579 422 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 MMP11P24347 488 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ANXA13P27216 316 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ALDH3A1P30838 453 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 PPT1P50897 306 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 DAP3P51398 398 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 PSMD7P51665 324 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 SH3BGRP55822 239 aaPredicted RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 GNG11P61952 73 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CASP8Q14790 479 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ARL6IP1Q15041 203 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CCDC73Q6ZRK6 1079 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ANKFN1Q8N957 763 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 DCAF4L2Q8NA75 395 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 SYT14Q8NB59 555 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CATSPER1Q8NEC5 780 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CCDC148Q8NFR7 591 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 OR4D5Q8NGN0 318 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CCDC12Q8WUD4 166 aaPredicted RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 CHCHD10Q8WYQ3 142 aaPredicted RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 LZICQ8WZA0 190 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 MRPS31Q92665 395 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ELSPBP1Q96BH3 223 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 TMEM101Q96IK0 257 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms