RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GOLGA6L1Q8N7Z2 621 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 ELOA3Q8NG57 546 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 OR9K2Q8NGE7 335 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 OR52E4Q8NGH9 312 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 SLC38A5Q8WUX1 472 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 TMEM45BQ96B21 275 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 SPATA5L1Q9BVQ7 753 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 SPATA9Q9BWV2 254 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 SLC17A5Q9NRA2 495 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 RLIMQ9NVW2 624 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 RASD1Q9Y272 281 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 B3GALT5Q9Y2C3 310 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 HRNRQ86YZ3 2850 aaPredicted RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 LIPT2A6NK58 231 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 AQP7P3A6NL99 342 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 AKAP8O43823 692 aaKnown RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 ADAM11O75078 769 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 VIMP08670 466 aaKnown RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 CSF3P09919 207 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 TFPTP0C1Z6 253 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 IMPDH2P12268 514 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 ZNF43P17038 809 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 FLNAP21333 2647 aaKnown RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 EDNRAP25101 427 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 APOBEC3AP31941 199 aaPredicted RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 NCALDP61601 193 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 FADDQ13158 208 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 SLC9B1Q4ZJI4 515 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 TSPO2Q5TGU0 170 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 C1orf140Q5VVS0 124 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 HMBOX1Q6NT76 420 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 ZNF836Q6ZNA1 936 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 ATG4DQ86TL0 474 aaPredicted RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 TMEM99Q8N816 258 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 MAPK1IP1LQ8NDC0 245 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 BBS10Q8TAM1 723 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 RNF217Q8TC41 542 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 STK35Q8TDR2 534 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 LRRC8CQ8TDW0 803 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 DYDC1Q8WWB3 177 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 SLC35B4Q969S0 331 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 SLC25A36Q96CQ1 311 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 AURKBQ96GD4 344 aaPredicted RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 TMEM19Q96HH6 336 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 SDR39U1Q9NRG7 319 aaPredicted RBP11.05□□□□□ -0.64
SNX1-209ENST00000559961 SLC7A10Q9NS82 523 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 NPAP1Q9NZP6 1156 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 CORO2BQ9UQ03 480 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 FKBP7Q9Y680 259 aa11.05□□□□□ -0.64
SNX1-209ENST00000559961 ABCA2Q9BZC7 2435 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 EVPLLA8MZ36 301 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 E7EQL1 145 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 CLIC1O00299 241 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 KLF11O14901 512 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 OR2T1O43869 369 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 CRLF1O75462 422 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 TGDSO95455 350 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 CD8AP01732 235 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 CRYAAP02489 173 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 ERCC1P07992 297 aaPredicted RBP11.04□□□□□ -0.64
SNX1-209ENST00000559961 ITGA5P08648 1049 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 SLC25A16P16260 332 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 PTNP21246 168 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 C5orf46Q6UWT4 87 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 VPS33AQ96AX1 596 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 MAELQ96JY0 434 aaKnown RBP11.04□□□□□ -0.64
SNX1-209ENST00000559961 ZNF317Q96PQ6 595 aaPredicted RBP11.04□□□□□ -0.64
SNX1-209ENST00000559961 GDF2Q9UK05 429 aaPredicted RBP11.04□□□□□ -0.64
SNX1-209ENST00000559961 FBXO9Q9UK97 447 aaPredicted RBP11.04□□□□□ -0.64
SNX1-209ENST00000559961 USH1CQ9Y6N9 552 aa11.04□□□□□ -0.64
SNX1-209ENST00000559961 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
SNX1-209ENST00000559961 NAV3Q8IVL0 2385 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 ZC3H12DA2A288 527 aaKnown RBP11.03□□□□□ -0.64
SNX1-209ENST00000559961 PRORSD1PA6NEY8 169 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 CD5LO43866 347 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 SERPINB7O75635 380 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 PNMTP11086 282 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 SH3BGRP55822 239 aaPredicted RBP11.03□□□□□ -0.64
SNX1-209ENST00000559961 SNRPD2P62316 118 aaKnown RBP11.03□□□□□ -0.64
SNX1-209ENST00000559961 BNIP2Q12982 314 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 RGNQ15493 299 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 NIPAL3Q6P499 406 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 SEZ6L2Q6UXD5 910 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 NET1Q7Z628 596 aaPredicted RBP11.03□□□□□ -0.64
SNX1-209ENST00000559961 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
SNX1-209ENST00000559961 MFSD8Q8NHS3 518 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 DNAJA4Q8WW22 397 aaPredicted RBP11.03□□□□□ -0.64
SNX1-209ENST00000559961 FAM168AQ92567 244 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 ZNF607Q96SK3 696 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 TMBIM4Q9HC24 238 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 TCF7L2Q9NQB0 619 aa11.03□□□□□ -0.64
SNX1-209ENST00000559961 NUP214P35658 2090 aaPredicted RBP11.02□□□□□ -0.64
SNX1-209ENST00000559961 HIVEP2P31629 2446 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 A8MV72 311 aaPredicted RBP11.02□□□□□ -0.65
SNX1-209ENST00000559961 SLC43A1O75387 559 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms