RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PSD2Q9BQI7 771 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 TMEM43Q9BTV4 400 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 IL1RAPQ9NPH3 570 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 B3GAT1Q9P2W7 334 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 SPTBN1Q01082 2364 aaKnown RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 TRAV36DV7A0A075B6V5 113 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 A0A1W2PNV4 684 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 DHRS12A0PJE2 317 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 NKX2-6A6NCS4 301 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 AQP12BA6NM10 295 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 GJE1A6NN92 205 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 ENO4A6NNW6 628 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 C19orf84I3L1E1 186 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 M0R082 166 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 CYTIPO60759 359 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 AGFG2O95081 481 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 AHSA1O95433 338 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 CLDN1O95832 211 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 CGAP01215 116 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 FABP3P05413 133 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 ZNF26P17031 533 aaPredicted RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 MAKP20794 623 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 GRNP28799 593 aaKnown RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 IST1P53990 364 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 CASP6P55212 293 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 RPS3AP61247 264 aaKnown RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 TFF3Q07654 80 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 LAPTM4AQ15012 233 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 ZNF74Q16587 644 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 MTX3Q5HYI7 312 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 PODNL1Q6PEZ8 512 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 NHLRC1Q6VVB1 395 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 FCRLAQ7L513 359 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 BTLAQ7Z6A9 289 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 TMEM179BQ7Z7N9 219 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 MRGPRGQ86SM5 289 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 SPATA24Q86W54 205 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 AQP12AQ8IXF9 295 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 FAM26EQ8N5C1 309 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 ZIC4Q8N9L1 334 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 OR4C15Q8NGM1 316 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 MFSD8Q8NHS3 518 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 ZNF417Q8TAU3 575 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 CPNE4Q96A23 557 aaPredicted RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 SLC25A36Q96CQ1 311 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 STARD4Q96DR4 205 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 ZNF587Q96SQ5 575 aaPredicted RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 POLR2J2Q9GZM3 115 aaKnown RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 POLR2J3Q9H1A7 115 aaKnown RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 TRAPPC4Q9Y296 219 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 SPIN1Q9Y657 262 aaPredicted RBP9.7□□□□□ -0.86
TPM1-217ENST00000559108 ICE1Q9Y2F5 2266 aa9.7□□□□□ -0.86
TPM1-217ENST00000559108 AQP7P3A6NL99 342 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 FAM90A27PA6NNH2 459 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 MS4A18H0YCH9 400 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 USP9YO00507 2555 aaPredicted RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 CDC42EP2O14613 210 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 SS18L1O75177 396 aaPredicted RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 GMNNO75496 209 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 CH25HO95992 272 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 H1F0P07305 194 aaKnown RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 HOXD4P09016 255 aaPredicted RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 TMIGD3P0DMS9 266 aaPredicted RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 THRBP10828 461 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 HLA-DOBP13765 273 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 RHCEP18577 417 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 AGTR1P30556 359 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 RASSF2P50749 326 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 MAP2K6P52564 334 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 TRAM2Q15035 370 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 MS4A18Q3C1V0 323 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 OTUD3Q5T2D3 398 aaPredicted RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 FAM69AQ5T7M9 428 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 ANKRD34AQ69YU3 496 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 YTHDF3Q7Z739 585 aaKnown RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 EPHX4Q8IUS5 362 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 TUSC5Q8IXB3 177 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 NRMQ8IXM6 262 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 PAPD5Q8NDF8 572 aaKnown RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 OR52J3Q8NH60 311 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 TMEM239Q8WW34 195 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 RND1Q92730 232 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 MPP4Q96JB8 637 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 ZNF385AQ96PM9 386 aaKnown RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 TM9SF2Q99805 663 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 FNDC11Q9BVV2 318 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 MAGIXQ9H6Y5 334 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 PRDM4Q9UKN5 801 aa9.69□□□□□ -0.86
TPM1-217ENST00000559108 MCTS1Q9ULC4 181 aaKnown RBP9.69□□□□□ -0.86
TPM1-217ENST00000559108 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 ALPK2Q86TB3 2170 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 IGKV3D-15A0A087WSY6 115 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 A0A1W2PRQ8 180 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 A1L4Q6 167 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 H3BNX3 289 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 KLF4O43474 513 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 SYNGR4O95473 234 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 GPIP06744 558 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 ASAH2BP0C7U1 165 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms