RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PRRC1Q96M27 445 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 FUZQ9BT04 418 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 TMEM43Q9BTV4 400 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 CADM1Q9BY67 442 aaKnown RBP10.17□□□□□ -0.78
SNX1-204ENST00000559061 OPN3Q9H1Y3 402 aaPredicted RBP10.17□□□□□ -0.78
SNX1-204ENST00000559061 TMEM27Q9HBJ8 222 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 C20orf141Q9NUB4 165 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 COQ3Q9NZJ6 369 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 NDUFAF4Q9P032 175 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 RHCGQ9UBD6 479 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 STOML1Q9UBI4 398 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 MAGEL2Q9UJ55 1249 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 RIMS3Q9UJD0 308 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 SLC13A4Q9UKG4 626 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 MCTS1Q9ULC4 181 aaKnown RBP10.17□□□□□ -0.78
SNX1-204ENST00000559061 PRPF19Q9UMS4 504 aaKnown RBP10.17□□□□□ -0.78
SNX1-204ENST00000559061 SLC9A8Q9Y2E8 581 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 SPIN1Q9Y657 262 aaPredicted RBP10.17□□□□□ -0.78
SNX1-204ENST00000559061 V9GYQ6 96 aa10.17□□□□□ -0.78
SNX1-204ENST00000559061 AQP7P3A6NL99 342 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 A8MXE2 369 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 PRSS44E7EML9 344 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 DIRAS1O95057 198 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 OR5F1O95221 314 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 SYNGR4O95473 234 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 HPRP00739 348 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 IFNA14P01570 189 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 CRHP06850 196 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 PNMTP11086 282 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 FKBP2P26885 142 aaKnown RBP10.16□□□□□ -0.78
SNX1-204ENST00000559061 CSNK2A1P68400 391 aaPredicted RBP10.16□□□□□ -0.78
SNX1-204ENST00000559061 CBX1P83916 185 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 SLC17A1Q14916 467 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 PDSS1Q5T2R2 415 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 OR2A2Q6IF42 318 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 PPP4R4Q6NUP7 873 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 PAQR6Q6TCH4 344 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 TFAP2EQ6VUC0 442 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 CYP2R1Q6VVX0 501 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.16□□□□□ -0.78
SNX1-204ENST00000559061 OFCC1Q8IZS5 231 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 CNEP1R1Q8N9A8 125 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 PFN4Q8NHR9 129 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 MFSD8Q8NHS3 518 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 ZNF775Q96BV0 537 aaPredicted RBP10.16□□□□□ -0.78
SNX1-204ENST00000559061 DHRS1Q96LJ7 313 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 THTPAQ9BU02 230 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 ENKD1Q9H0I2 346 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 ADPRHL2Q9NX46 363 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 ACTR3BQ9P1U1 418 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 RPS6KB2Q9UBS0 482 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 CRYBG3Q68DQ2 2970 aa10.16□□□□□ -0.78
SNX1-204ENST00000559061 TRAV36DV7A0A075B6V5 113 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 hCG_2039718K7EN88 272 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 M0R082 166 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 DVL2O14641 736 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 AHSA1O95433 338 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 CD8BP10966 210 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 CBLP22681 906 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 GRPRP30550 384 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 ASCL1P50553 236 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 TAS2R41P59536 307 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 SLC35A1P78382 337 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 RASGEF1BQ0VAM2 473 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 FHL1Q13642 323 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 TRIM25Q14258 630 aaKnown RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 PDK3Q15120 406 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 RNPS1Q15287 305 aaKnown RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 ZNF74Q16587 644 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 OTUD3Q5T2D3 398 aaPredicted RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 ZNF787Q6DD87 383 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 C22orf34Q6ZV56 151 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 LUZP2Q86TE4 346 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 MEX3DQ86XN8 651 aaKnown RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 EPHX4Q8IUS5 362 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 ARHGAP24Q8N264 748 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 KDM8Q8N371 416 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 LRRC17Q8N6Y2 441 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 ZNF610Q8N9Z0 462 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 PIK3C3Q8NEB9 887 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 OR6K3Q8NGY3 331 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 ZNF417Q8TAU3 575 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 CCDC124Q96CT7 223 aaKnown RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 NSMCE2Q96MF7 247 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 ZNF385AQ96PM9 386 aaKnown RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 ZNF587Q96SQ5 575 aaPredicted RBP10.15□□□□□ -0.78
SNX1-204ENST00000559061 BTBD10Q9BSF8 475 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 TIGARQ9NQ88 270 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 GALNT8Q9NY28 637 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 RPS6KA6Q9UK32 745 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 FLVCR1Q9Y5Y0 555 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 ENPP4Q9Y6X5 453 aa10.15□□□□□ -0.78
SNX1-204ENST00000559061 PRR14LQ5THK1 2151 aa10.15□□□□□ -0.79
SNX1-204ENST00000559061 DCHS2Q6V1P9 2916 aa10.14□□□□□ -0.79
SNX1-204ENST00000559061 ZNF724A8MTY0 619 aa10.14□□□□□ -0.79
SNX1-204ENST00000559061 EEF1E1-BLOC1S5C9J1V9 151 aa10.14□□□□□ -0.79
SNX1-204ENST00000559061 MS4A18H0YCH9 400 aa10.14□□□□□ -0.79
SNX1-204ENST00000559061 KPNA4O00629 521 aaPredicted RBP10.14□□□□□ -0.79
SNX1-204ENST00000559061 GSC2O15499 205 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms