RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TMEM53Q6P2H8 277 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 CCDC137Q6PK04 289 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 HACD2Q6Y1H2 254 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 TMEM26Q6ZUK4 368 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 NDUFAF7Q7L592 441 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 CDKL3Q8IVW4 592 aaPredicted RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 ZNF100Q8IYN0 542 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 CENPLQ8N0S6 344 aaPredicted RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 UBE2J2Q8N2K1 259 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 COMMD1Q8N668 190 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 FADS6Q8N9I5 356 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 FNDC5Q8NAU1 212 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ZNF461Q8TAF7 563 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 CD300LFQ8TDQ1 290 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 MITD1Q8WV92 249 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 SCFD1Q8WVM8 642 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 TSEN15Q8WW01 171 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 SLC35B4Q969S0 331 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 PSMG2Q969U7 264 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 C18orf25Q96B23 403 aaPredicted RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 CHMP6Q96FZ7 201 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ELMO2Q96JJ3 720 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 SMIM14Q96QK8 99 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 SPATA16Q9BXB7 569 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ERVK-6Q9BXR3 956 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 HES7Q9BYE0 225 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 KRTAP4-3Q9BYR4 195 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 PRRG3Q9BZD7 231 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 MAGT1Q9H0U3 335 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 BLZF1Q9H2G9 400 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 FBXO44Q9H4M3 255 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 RGCCQ9H4X1 137 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ACTR8Q9H981 624 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 NANOGQ9H9S0 305 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 FN3KRPQ9HA64 309 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 NEK6Q9HC98 313 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 MRPL40Q9NQ50 206 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 CHRAC1Q9NRG0 131 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 EURLQ9NYK6 297 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 EHFQ9NZC4 300 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 IL37Q9NZH6 218 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ONECUT1Q9UBC0 465 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GHRLQ9UBU3 117 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 DCDC2Q9UHG0 476 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GGA2Q9UJY4 613 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 EXOSC1Q9Y3B2 195 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 PPIL1Q9Y3C6 166 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 BZW2Q9Y6E2 419 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 PTPRUQ92729 1446 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 RAI1Q7Z5J4 1906 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 A0A0U1RQS6 177 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 C1orf232A0A0U1RR37 186 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 A0A0U1RRA0 63 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 GOLGA6L4A6NEF3 574 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TRPC5OSA6NMA1 111 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 B4DXG7 233 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 GOLGA8RI6L899 631 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ZNF701M0R085 212 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 ABCD4O14678 606 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ZNF264O43296 627 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PPIHO43447 177 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 RNF13O43567 381 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 CDH16O75309 829 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 VPS26AO75436 327 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 WBP4O75554 376 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 LYPLA1O75608 230 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 RBBP9O75884 186 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 MYO1DO94832 1006 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PRKACAP17612 351 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PAICSP22234 425 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 CBX5P45973 191 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 CEBPDP49716 269 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 EMDP50402 254 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 EFNA3P52797 238 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 GPX6P59796 221 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TIMM10P62072 90 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 MYBPC1Q00872 1141 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 OC90Q02509 493 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 PLOD1Q02809 727 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 NCBP1Q09161 790 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 ZP4Q12836 540 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 MERTKQ12866 999 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 UBE2V2Q15819 145 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 IL17AQ16552 155 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ALKBH6Q3KRA9 238 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TEX44Q53QW1 395 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TMEM41BQ5BJD5 291 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 OR2B11Q5JQS5 317 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 RABGAP1LQ5R372 815 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 SAPCD1Q5SSQ6 148 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 THEM4Q5T1C6 240 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 IL23RQ5VWK5 629 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 SLC25A25Q6KCM7 469 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TPGS1Q6ZTW0 290 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 BZW1Q7L1Q6 419 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 AKAP14Q86UN6 197 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ECHDC2Q86YB7 292 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 SELENOHQ8IZQ5 122 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 FAM86B1Q8N7N1 296 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms