RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HNRNPCL1O60812 293 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 AKR7A3O95154 331 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 TFPTP0C1Z6 253 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 HNRNPCL4P0DMR1 293 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 KITP10721 976 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 PTNP21246 168 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 IL12AP29459 219 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 SLC18A1P54219 525 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 DSTNP60981 165 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 IRX1P78414 480 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 OR7A5Q15622 319 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 TSPO2Q5TGU0 170 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 C9orf135Q5VTT2 229 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 PODNL1Q6PEZ8 512 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 MSANTD1Q6ZTZ1 278 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 HIPK1Q86Z02 1210 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 TMEM99Q8N816 258 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 WDR31Q8NA23 367 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 OR9K2Q8NGE7 335 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 SLC38A5Q8WUX1 472 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 KCNS3Q9BQ31 491 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 RAD21L1Q9H4I0 556 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 MANSC1Q9H8J5 431 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 TPT1P8Q9HAU6 139 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 ZIM2Q9NZV7 527 aa11.94□□□□□ -0.5
SNRPA1-204ENST00000558020 HEATR1Q9H583 2144 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 ZC3H12DA2A288 527 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 AQP7P3A6NL99 342 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 H7C417 338 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 UBDO15205 165 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 SNNO75324 88 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 C1QCP02747 245 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 CSF3P09919 207 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 GKN3PP0CG01 181 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 SLC25A16P16260 332 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 EFNA4P52798 201 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 PLAURQ03405 335 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 C6orf10Q5SRN2 563 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 C11orf71Q6IPW1 123 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 HMBOX1Q6NT76 420 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 VRK2Q86Y07 508 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 FAM168AQ92567 244 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 AURKBQ96GD4 344 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 SDR39U1Q9NRG7 319 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 ADPRHL2Q9NX46 363 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 ADAM21Q9UKJ8 722 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 RASD1Q9Y272 281 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 COL6A5A8TX70 2615 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 ATRQ13535 2644 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 ABCA1O95477 2261 aa11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 CHD3Q12873 2000 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-204ENST00000558020 DSPPQ9NZW4 1301 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 VSTM5A8MXK1 200 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 ZNF587BE7ETH6 402 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 BCHEP06276 602 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 ETFAP13804 333 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 ACAA2P42765 397 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 POLR2JP52435 117 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 WDR4P57081 412 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 CHRFAM7AQ494W8 412 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 C1orf140Q5VVS0 124 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 CXXC5Q7LFL8 322 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 MIER2Q8N344 545 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 ZIC4Q8N9L1 334 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 MGARPQ8TDB4 240 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 STK35Q8TDR2 534 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 SLC35B4Q969S0 331 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 ZNF317Q96PQ6 595 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 TNFRSF13CQ96RJ3 184 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 SPATA9Q9BWV2 254 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 ZNF443Q9Y2A4 671 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 PLCE1Q9P212 2302 aa11.92□□□□□ -0.5
SNRPA1-204ENST00000558020 SONP18583 2426 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 IGHV4-30-2A0A087WSY4 118 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ELOA3DA6NLF2 546 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 AHSA1O95433 338 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 F12P00748 615 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 CRYAAP02489 173 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 GTF2E2P29084 291 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 LOXL1Q08397 574 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 SPOCK1Q08629 439 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ELOA3BQ3SY89 546 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ZNF311Q5JNZ3 666 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 PRAMEF8Q5VWM4 474 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 PRAMEF7Q5VXH5 474 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ZNF836Q6ZNA1 936 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 CREB3L2Q70SY1 520 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 CLIP4Q8N3C7 705 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ELOA3Q8NG57 546 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms