RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 OR51J1Q9H342 316 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 HAO2Q9NYQ3 351 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 SERTAD3Q9UJW9 196 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 A0A0J9YY10 115 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 TRABD2BA6NFA1 517 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 OGG1O15527 345 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 TRIM3O75382 744 aaPredicted RBP11.8□□□□□ -0.52
LDLR-207ENST00000558013 NDUFB2O95178 105 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CT45A8P0DMV1 189 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CT45A9P0DMV2 189 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 UQCRC1P31930 480 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 STX4Q12846 297 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CAMK2BQ13554 666 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 ZSWIM7Q19AV6 140 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 ODF4Q2M2E3 257 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CT45A2Q5DJT8 189 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 RNF44Q7L0R7 432 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 KANSL1Q7Z3B3 1105 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 TAF8Q7Z7C8 310 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 MS4A15Q8N5U1 240 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 RGP1Q92546 391 aaPredicted RBP11.8□□□□□ -0.52
LDLR-207ENST00000558013 NKX3-1Q99801 234 aaPredicted RBP11.8□□□□□ -0.52
LDLR-207ENST00000558013 TWSG1Q9GZX9 223 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 DPAGT1Q9H3H5 408 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 KLK11Q9UBX7 282 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 ERVK-19Q9WJR5 959 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 TCRBV21S2A2A0A5A6 115 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 DCTN6O00399 190 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 ZFPL1O95159 310 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 GPANK1O95872 356 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CSTAP01040 98 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 IFNGP01579 166 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 F13BP05160 661 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 SPI1P17947 270 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CDKN2AP42771 156 aaKnown RBP11.8□□□□□ -0.52
LDLR-207ENST00000558013 TAS2R43P59537 309 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 BTG1P62324 171 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 PON3Q15166 354 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 ULK3Q6PHR2 472 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 CBLN3Q6UW01 205 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 DNAAF1Q8NEP3 725 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 C16orf52Q8NHV5 167 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 GIMAP1Q8WWP7 306 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
LDLR-207ENST00000558013 WBP1LQ9NX94 342 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 RPS6KB2Q9UBS0 482 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 ICAM5Q9UMF0 924 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
LDLR-207ENST00000558013 TMEM184BQ9Y519 407 aaPredicted RBP11.8□□□□□ -0.52
LDLR-207ENST00000558013 DHFRP00374 187 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 FCER2P06734 321 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 MAOBP27338 520 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 AQP2P41181 271 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 CCR4P51679 360 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
LDLR-207ENST00000558013 SNTB2Q13425 540 aaKnown RBP11.79□□□□□ -0.52
LDLR-207ENST00000558013 BICRALQ6AI39 1079 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 LSMEM1Q8N8F7 131 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 ZNF321PQ8N8H1 164 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 ZNF431Q8TF32 576 aaPredicted RBP11.79□□□□□ -0.52
LDLR-207ENST00000558013 MOGAT1Q96PD6 335 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 TRIM2Q9C040 744 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 NKX2-4Q9H2Z4 354 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 ING1Q9UK53 422 aaPredicted RBP11.79□□□□□ -0.52
LDLR-207ENST00000558013 OR10H1Q9Y4A9 318 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 CLDN16Q9Y5I7 305 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 NPFFR2Q9Y5X5 522 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 C7orf66A4D0T2 115 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 UBL3O95164 117 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 WISP1O95388 367 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 UCHL1P09936 223 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 OR2T7P0C7T2 308 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 SRMP19623 302 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 STOMP27105 288 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 GDNFP39905 211 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 SOX2P48431 317 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 RAB38P57729 211 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 UBE2IP63279 158 aaKnown RBP11.79□□□□□ -0.52
LDLR-207ENST00000558013 ACTC1P68032 377 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 ACTA1P68133 377 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 ZCCHC12Q6PEW1 402 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 FCRLAQ7L513 359 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 LINGO2Q7L985 606 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 OR2T27Q8NH04 317 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 SGTBQ96EQ0 304 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 HYLS1Q96M11 299 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 RCE1Q9Y256 329 aa11.79□□□□□ -0.52
LDLR-207ENST00000558013 B4DGG1 531 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 OR8G3PP0DMU2 310 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 ENPP1P22413 925 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 MMP15P51511 669 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 HHEXQ03014 270 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 CD226Q15762 336 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 GSG1Q2KHT4 349 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 CDONQ4KMG0 1287 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 HSD17B12Q53GQ0 312 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 C10orf53Q8N6V4 93 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
LDLR-207ENST00000558013 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms