RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 B3GALNT1O75752 331 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 HIST1H1CP16403 213 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ANXA7P20073 488 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 S100A11P31949 105 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 DRD3P35462 400 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 VIPR2P41587 438 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 PPP2CBP62714 309 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 PPP2CAP67775 309 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ID2Q02363 134 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 BTN1A1Q13410 526 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 EXOSC6Q5RKV6 272 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 OR5M10Q6IEU7 315 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 OVCH2Q7RTZ1 564 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ZBTB44Q8NCP5 570 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 OR6M1Q8NGM8 313 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 SYNPRQ8TBG9 265 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ZCCHC10Q8TBK6 192 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ORAI1Q96D31 301 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 RSPRY1Q96DX4 576 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ARSGQ96EG1 525 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 C1QTNF6Q9BXI9 259 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 CCDC86Q9H6F5 360 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ANKRD10Q9NXR5 420 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF281Q9Y2X9 895 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 LRRC72A6NJI9 287 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 PPM1BO75688 479 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 RP2O75695 350 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 NDUFB6O95139 128 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 NDUFB2O95178 105 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 PAK4O96013 591 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 NMBP08949 121 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 CALCBP10092 127 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 DIO1P49895 249 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 P2RX1P51575 399 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 MECP2P51608 486 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 RUNX2Q13950 521 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 TUSC1Q2TAM9 212 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 DEFB134Q4QY38 66 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 B3GNTL1Q67FW5 361 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ZCCHC12Q6PEW1 402 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 SCARB1Q8WTV0 552 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 HMGB4Q8WW32 186 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ST8SIA4Q92187 359 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 RIT1Q92963 219 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 MYADMQ96S97 322 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 DPYSL5Q9BPU6 564 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 SHARPINQ9H0F6 387 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 KIR3DX1Q9H7L2 352 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 FLRT3Q9NZU0 649 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 GLS2Q9UI32 602 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 DAPP1Q9UN19 280 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 INSL6Q9Y581 213 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 A0A087WV62 115 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 UBE2QL1A1L167 161 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 SUSD5O60279 629 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 BRINP1O60477 761 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 CEACAM5P06731 702 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HNRNPA1P09651 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 LINC00271P0C7V0 271 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 CLDN12P56749 244 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 SEC61A1P61619 476 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 FHL1Q13642 323 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HLXQ14774 488 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 GAB4Q2WGN9 574 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 AGBL4Q5VU57 503 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 PWWP2BQ6NUJ5 590 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 OR4E2Q8NGC2 313 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 COQ8AQ8NI60 647 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 LCN9Q8WX39 176 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 CNOT9Q92600 299 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 CXorf58Q96LI9 332 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF426Q9BUY5 554 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 TRIM2Q9C040 744 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 PRDM9Q9NQV7 894 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 COPS3Q9UNS2 423 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 PCDHGA5Q9Y5G8 931 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HEBP2Q9Y5Z4 205 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 COLEC10Q9Y6Z7 277 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 MYO7AQ13402 2215 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 TP53BP1Q12888 1972 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 OTOL1A6NHN0 477 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 PRR19A6NJB7 356 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 LDOC1O95751 146 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HIST1H2ABP04908 130 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 NGFRP08138 427 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 EPCAMP16422 314 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 DCTDP32321 178 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 GABRA3P34903 492 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 ART1P52961 327 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 DLX5P56178 289 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 SNRPNP63162 240 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 PLAURQ03405 335 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 ALG10BQ5I7T1 473 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 FAAP20Q6NZ36 180 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HIST3H2AQ7L7L0 130 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 ESX1Q8N693 406 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF614Q8N883 585 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 NSMAFQ92636 917 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms