RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 M0R3H8 397 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 CASKO14936 926 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 OR2T1O43869 369 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 NPIPB7O75200 414 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 PPP3CBP16298 524 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 CD247P20963 164 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 GTF2E2P29084 291 aaKnown RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 UGT2B10P36537 528 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 SLC16A1P53985 500 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 DAZAP2Q15038 168 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 OTUD3Q5T2D3 398 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 C8orf82Q6P1X6 216 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 SLC15A3Q8IY34 581 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 ANKS4BQ8N8V4 417 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 MFSD8Q8NHS3 518 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 RNF217Q8TC41 542 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF300Q96RE9 604 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 EPYCQ99645 322 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 KLHL4Q9C0H6 718 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 NOSIPQ9Y314 301 aaKnown RBP11.1□□□□□ -0.63
SLIRP-211ENST00000557623 A0A087WUJ7 227 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 A6NNC1 897 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF716A6NP11 495 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 GSTA4O15217 222 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 TPST2O60704 377 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 VAMP5O95183 116 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
SLIRP-211ENST00000557623 KLK2P20151 261 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 KDELR2P33947 212 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 OR3A2P47893 321 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 SLC7A2P52569 658 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 LIPEQ05469 1076 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-211ENST00000557623 TMEM225Q6GV28 225 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF100Q8IYN0 542 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 OR6T1Q8NGN1 323 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 VANGL1Q8TAA9 524 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-211ENST00000557623 LURAP1Q96LR2 239 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 SF3B5Q9BWJ5 86 aaKnown RBP11.09□□□□□ -0.63
SLIRP-211ENST00000557623 ALG2Q9H553 416 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 PARPBPQ9NWS1 579 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 ADPRHL2Q9NX46 363 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 FAM53CQ9NYF3 392 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF226Q9NYT6 803 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 USP22Q9UPT9 525 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 TESMINQ9Y4I5 508 aa11.09□□□□□ -0.63
SLIRP-211ENST00000557623 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 ZNF814B7Z6K7 855 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 NME4O00746 187 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CHP2O43745 196 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 MRPL33O75394 65 aaKnown RBP11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CTAG2O75638 210 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 AKR7A3O95154 331 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 FAM107AO95990 144 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 PSMB1P20618 241 aaKnown RBP11.08□□□□□ -0.64
SLIRP-211ENST00000557623 RPS5P46782 204 aaKnown RBP11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CRYBA2P53672 197 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CDH12P55289 794 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 PSME3P61289 254 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 EGR4Q05215 589 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 SLC17A1Q14916 467 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 MFSD13AQ14CX5 517 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 P2RY6Q15077 328 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 LRRC23Q53EV4 343 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CYBRD1Q53TN4 286 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 ENTPD8Q5MY95 495 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 FAM69AQ5T7M9 428 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 FBXW10Q5XX13 1052 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 STAC2Q6ZMT1 411 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 Q6ZT83 130 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CARM1Q86X55 608 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 TMEM99Q8N816 258 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 STEAP2Q8NFT2 490 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 OR6S1Q8NH40 331 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 LZICQ8WZA0 190 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 WFIKKN1Q96NZ8 548 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 WFDC6Q9BQY6 131 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 TMEM43Q9BTV4 400 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 POLR2J2Q9GZM3 115 aaKnown RBP11.08□□□□□ -0.64
SLIRP-211ENST00000557623 PCDHAC1Q9H158 963 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 POLR2J3Q9H1A7 115 aaKnown RBP11.08□□□□□ -0.64
SLIRP-211ENST00000557623 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 ABCD2Q9UBJ2 740 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 TAGLN3Q9UI15 199 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 SH3GLB1Q9Y371 365 aa11.08□□□□□ -0.64
SLIRP-211ENST00000557623 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms