RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 YBEYP58557 167 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 TPI1P60174 286 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 OTUD4Q01804 1114 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 PPIDQ08752 370 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 CASP8Q14790 479 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 PPP1R7Q15435 360 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 TPSAB1Q15661 275 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 IFI44LQ53G44 452 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 DCAF12Q5T6F0 453 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SYPL2Q5VXT5 272 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 NCBP2-AS2Q69YL0 99 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 CYS1Q717R9 158 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 TRMT10CQ7L0Y3 403 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 SCD5Q86SK9 330 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ASPGQ86U10 573 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 TAC4Q86UU9 113 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 C17orf64Q86WR6 236 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 CDKL3Q8IVW4 592 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 LAX1Q8IWV1 398 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ZNF683Q8IZ20 524 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 KRT222Q8N1A0 295 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 UMODL1-AS1Q8N2C9 162 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 RIBC1Q8N443 379 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 ATP6V0D2Q8N8Y2 350 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ZNF557Q8N988 423 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 Q8N9G6 341 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 STKLD1Q8NE28 680 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 FBXO25Q8TCJ0 367 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SETD7Q8WTS6 366 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 FBXO32Q969P5 355 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ELSPBP1Q96BH3 223 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 TBC1D31Q96DN5 1066 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 IMMP1LQ96LU5 166 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 GUCD1Q96NT3 240 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 DDX50Q9BQ39 737 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 C19orf43Q9BQ61 176 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 NAT9Q9BTE0 207 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 CALN1Q9BXU9 219 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ROPN1BQ9BZX4 212 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 CXXC4Q9H2H0 198 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ROPN1Q9HAT0 212 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 DDIT4Q9NX09 232 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 OR12D3Q9UGF7 316 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 FBXW2Q9UKT8 454 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 DNPEPQ9ULA0 475 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 HPCAL4Q9UM19 191 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 KCNK6Q9Y257 313 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 NACAE9PAV3 2078 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SNRNP200O75643 2136 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 CACNA1EQ15878 2313 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 MDC1Q14676 2089 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 LRP4O75096 1905 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 EML5Q05BV3 1969 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SGK1O00141 431 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 EEF2KO00418 725 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 CHUKO15111 745 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 ALOX15BO15296 676 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 PSMD3O43242 534 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 MFSD11O43934 449 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 FMO6PO60774 539 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 NME6O75414 186 aaPredicted RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 TTC4O95801 387 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 KRT14P02533 472 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 IVLP07476 585 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 OR4Q2P0C623 313 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 EZRP15311 586 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 CCNCP24863 283 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 ATP5C1P36542 298 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 SSR1P43307 286 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 P2RY4P51582 365 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SLC18A1P54219 525 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 RIPPLY3P57055 190 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 KCNK10P57789 538 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 EIF3EP60228 445 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 GNB2P62879 340 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SLC7A9P82251 487 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SARNPP82979 210 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 NME3Q13232 169 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 ASAH1Q13510 395 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 KCNJ11Q14654 390 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 MEF2DQ14814 521 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SPHARQ15513 63 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 UAP1Q16222 522 aaPredicted RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 ZNF674Q2M3X9 581 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 PARP15Q460N3 678 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 TNFAIP8L3Q5GJ75 292 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 ACER2Q5QJU3 275 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 KCTD11Q693B1 232 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SCYL2Q6P3W7 929 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 Q6P435 159 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 CD164L2Q6UWJ8 174 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 TMEM184AQ6ZMB5 413 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 TMEM150AQ86TG1 271 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SETD3Q86TU7 594 aaPredicted RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 MRPL43Q8N983 215 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 NAT8LQ8N9F0 302 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 Q8N9L7 120 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 NFAM1Q8NET5 270 aaPredicted RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 LPCAT1Q8NF37 534 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 TFB1MQ8WVM0 346 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms