RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 IDUAP35475 653 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 SIRPAP78324 504 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 ZNF474Q6S9Z5 364 aaPredicted RBP20.05■□□□□ 0.8
PABPN1-206ENST00000556809 RNF128Q8TEB7 428 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 NSMCE2Q96MF7 247 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 BTBD10Q9BSF8 475 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 POLR2J2Q9GZM3 115 aaKnown RBP20.05■□□□□ 0.8
PABPN1-206ENST00000556809 POLR2J3Q9H1A7 115 aaKnown RBP20.05■□□□□ 0.8
PABPN1-206ENST00000556809 GLRX2Q9NS18 164 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 TACC2O95359 2948 aa20.05■□□□□ 0.8
PABPN1-206ENST00000556809 DNPH1O43598 174 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 NPIPB7O75200 414 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 THY1P04216 161 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 IFNW1P05000 195 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 ENPP1P22413 925 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 OR2B6P58173 313 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 TAS2R41P59536 307 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 EGR4Q05215 589 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 C1orf140Q5VVS0 124 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 FCRLAQ7L513 359 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 FAM222BQ8WU58 562 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 ZHX1-C8orf76Q96EF9 292 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 CLPTM1LQ96KA5 538 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 OPN3Q9H1Y3 402 aaPredicted RBP20.04■□□□□ 0.8
PABPN1-206ENST00000556809 MUC13Q9H3R2 512 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 ACTR3BQ9P1U1 418 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 CLEC4AQ9UMR7 237 aa20.04■□□□□ 0.8
PABPN1-206ENST00000556809 IGKV1D-42A0A075B6H8 117 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 IGHV3-15A0A0B4J1V0 119 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 TUBAL3A6NHL2 446 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 SMAD9O15198 467 aaKnown RBP20.03■□□□□ 0.8
PABPN1-206ENST00000556809 SMNDC1O75940 238 aaKnown RBP eCLIP20.03■□□□□ 0.8
PABPN1-206ENST00000556809 ATP5HO75947 161 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 LYPD3O95274 346 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 AHSA1O95433 338 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 SLC35A1P78382 337 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 C5orf46Q6UWT4 87 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 FAM86B1Q8N7N1 296 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 ZNF610Q8N9Z0 462 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 OR6K3Q8NGY3 331 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 LINC01560Q8TB33 94 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 SLC41A3Q96GZ6 507 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 AMBRA1Q9C0C7 1298 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 PLSCR4Q9NRQ2 329 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 SLC7A7Q9UM01 511 aa20.03■□□□□ 0.8
PABPN1-206ENST00000556809 LIPT2A6NK58 231 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 CTAG2O75638 210 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 PRKD3O94806 890 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 OR5F1O95221 314 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 PLGP00747 810 aaPredicted RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 GPIP06744 558 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 KLK2P20151 261 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 FPR1P21462 350 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 RASSF2P50749 326 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 FAM27E3Q08E93 113 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 PIN1Q13526 163 aaPredicted RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 TRIM25Q14258 630 aaKnown RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 DAZAP2Q15038 168 aaPredicted RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 RNPS1Q15287 305 aaKnown RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 GTF2IRD2BQ6EKJ0 949 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 LINC00114Q6XXX2 140 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 GTF2IRD2Q86UP8 949 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 SLC43A2Q8N370 569 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 ABHD3Q8WU67 409 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 CCDC124Q96CT7 223 aaKnown RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 KTI12Q96EK9 354 aaPredicted RBP20.02■□□□□ 0.8
PABPN1-206ENST00000556809 MPP4Q96JB8 637 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 TAPBPLQ9BX59 468 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 PROCRQ9UNN8 238 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 EMC9Q9Y3B6 208 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 V9GYQ6 96 aa20.02■□□□□ 0.8
PABPN1-206ENST00000556809 EIF1BO60739 113 aaKnown RBP20.01■□□□□ 0.79
PABPN1-206ENST00000556809 DNAJC8O75937 253 aaPredicted RBP20.01■□□□□ 0.79
PABPN1-206ENST00000556809 EPXP11678 715 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 ATP6V1B2P21281 511 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 RPS5P46782 204 aaKnown RBP20.01■□□□□ 0.79
PABPN1-206ENST00000556809 OR7A5Q15622 319 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 CYP2R1Q6VVX0 501 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 WDR88Q6ZMY6 472 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 P3H2Q8IVL5 708 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 ASB9Q96DX5 294 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 PYURFQ96I23 114 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 PRRC1Q96M27 445 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 TMEM43Q9BTV4 400 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 PTDSS2Q9BVG9 487 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 ELOVL5Q9NYP7 299 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 RIMS3Q9UJD0 308 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 ING1Q9UK53 422 aaPredicted RBP20.01■□□□□ 0.79
PABPN1-206ENST00000556809 A4GNTQ9UNA3 340 aa20.01■□□□□ 0.79
PABPN1-206ENST00000556809 TRAV36DV7A0A075B6V5 113 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 CYTIPO60759 359 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 THRBP10828 461 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 PTNP21246 168 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 AGTR1P30556 359 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 IFNA8P32881 189 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 CD79BP40259 229 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 YAP1P46937 504 aaKnown RBP20■□□□□ 0.79
PABPN1-206ENST00000556809 CTBP2P56545 445 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 MS4A2Q01362 244 aa20■□□□□ 0.79
PABPN1-206ENST00000556809 ABLIM2Q6H8Q1 611 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms