RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CASP8Q14790 479 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 ARL6IP1Q15041 203 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 DMRTC1Q5HYR2 192 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 UFSP1Q6NVU6 142 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 METAP1DQ6UB28 335 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-210ENST00000556718 CCDC73Q6ZRK6 1079 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 OTUD6AQ7L8S5 288 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 H2BFWTQ7Z2G1 175 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 MYOCDQ8IZQ8 938 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 SEC22AQ96IW7 307 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 UPF3BQ9BZI7 483 aaKnown RBP3.34□□□□□ -1.87
PRPF39-210ENST00000556718 TSGA10Q9BZW7 698 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 CLSTN2Q9H4D0 955 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 MIEF1Q9NQG6 463 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 RAB20Q9NX57 234 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 ONECUT1Q9UBC0 465 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 RABL2AQ9UBK7 228 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-210ENST00000556718 ZNF639Q9UID6 485 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 RIMS3Q9UJD0 308 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 IKZF2Q9UKS7 526 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 N6AMT1Q9Y5N5 214 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 USP16Q9Y5T5 823 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 FLVCR1Q9Y5Y0 555 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 GMEB1Q9Y692 573 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 EVC2Q86UK5 1308 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 PTPRGP23470 1445 aa3.34□□□□□ -1.88
PRPF39-210ENST00000556718 GRIN2AQ12879 1464 aa3.34□□□□□ -1.88
PRPF39-210ENST00000556718 PLB1Q6P1J6 1458 aa3.34□□□□□ -1.88
PRPF39-210ENST00000556718 TEX14Q8IWB6 1497 aa3.34□□□□□ -1.88
PRPF39-210ENST00000556718 PPIAL4EA0A075B759 164 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 IDSB3KWA1 339 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 HAS3O00219 553 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 EIF3HO15372 352 aaKnown RBP eCLIP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 PHF1O43189 567 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 PI15O43692 258 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 PRKAB2O43741 272 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 RAMP3O60896 148 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 FLOT1O75955 427 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 AGTP01019 485 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 IGHG4P01861 327 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 STSP08842 583 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 PPIAL4FP0DN26 164 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 MCF2P10911 925 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 TNNI1P19237 187 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 SYT1P21579 422 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 VDAC1P21796 283 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 SHC1P29353 583 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 NTSP30990 170 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 CCT6AP40227 531 aaKnown RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 LEPP41159 167 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 LIM2P55344 173 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 ERVPABLB-1P60509 514 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 GNGT1P63211 74 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 MRPS25P82663 173 aaKnown RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 CKAP4Q07065 602 aaKnown RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 ASAH1Q13510 395 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 ZNF239Q16600 458 aaKnown RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 TIMM50Q3ZCQ8 353 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 PAGE2BQ5JRK9 111 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 HSDL2Q6YN16 418 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 GDPD3Q7L5L3 318 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 DHDDSQ86SQ9 333 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 CDR2LQ86X02 465 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 ECHDC2Q86YB7 292 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 NAXDQ8IW45 347 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 TTC5Q8N0Z6 440 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 OR8K1Q8NGG5 319 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 KCNG3Q8TAE7 436 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 MAGEE2Q8TD90 523 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 MCHR1Q99705 422 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 BPIFA3Q9BQP9 254 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 TRIM62Q9BVG3 475 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 GPR61Q9BZJ8 451 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 API5Q9BZZ5 524 aaKnown RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 VCPKMTQ9H867 229 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 RPS10P5Q9NQ39 176 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 OR1A1Q9P1Q5 309 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 ERVW-1Q9UQF0 538 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 PDE10AQ9Y233 779 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 CAB39Q9Y376 341 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-210ENST00000556718 KIF24Q5T7B8 1368 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 SNAPC4Q5SXM2 1469 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 KDM5CP41229 1560 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 TOP2BQ02880 1626 aa3.33□□□□□ -1.88
PRPF39-210ENST00000556718 A0A1B0GUS0 222 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 A0A1B0GWB2 263 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 LRRIQ3A6PVS8 624 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-210ENST00000556718 E7ENQ6 273 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 H3BQF6 201 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 K7ENP7 123 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 FOXE1O00358 373 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-210ENST00000556718 STX10O60499 249 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 PFDN1O60925 122 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 IDO1P14902 403 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 ALDH3A1P30838 453 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 CASP14P31944 242 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 UGT1A3P35503 534 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 KIR2DS2P43631 304 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 STARP49675 285 aa3.32□□□□□ -1.88
PRPF39-210ENST00000556718 TPMTP51580 245 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms