RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 SERINC4A6NH21 518 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 DUXAA6NLW8 204 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 ABCD4O14678 606 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 DNPH1O43598 174 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 LYZL6O75951 148 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 APOL3O95236 402 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 H6PDO95479 791 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 SLC25A16P16260 332 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 EGR1P18146 543 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 EFNA1P20827 205 aaPredicted RBP8.79□□□□□ -1
SCFD1-220ENST00000556486 LGALS4P56470 323 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 HBA1P69905 142 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 TP53BP2Q13625 1128 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 QPRTQ15274 297 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 CARTPTQ16568 116 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 NRF1Q16656 503 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 SMU1Q2TAY7 513 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 FAM174BQ3ZCQ3 159 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 ATP6AP1LQ52LC2 224 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 ABLIM2Q6H8Q1 611 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 C4orf33Q8N1A6 199 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 RIBC1Q8N443 379 aaPredicted RBP8.79□□□□□ -1
SCFD1-220ENST00000556486 MIPOL1Q8TD10 442 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 C10orf105Q8TEF2 133 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 TSPEARQ8WU66 669 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 SLC25A43Q8WUT9 341 aaPredicted RBP8.79□□□□□ -1
SCFD1-220ENST00000556486 MSI2Q96DH6 328 aaKnown RBP8.79□□□□□ -1
SCFD1-220ENST00000556486 ZIM3Q96PE6 472 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 RHOXF2Q9BQY4 288 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 ZNF350Q9GZX5 532 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 LAT2Q9GZY6 243 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 ANKZF1Q9H8Y5 726 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 TPSG1Q9NRR2 321 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 ASIC5Q9NY37 505 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 NPAP1Q9NZP6 1156 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 KCNE5Q9UJ90 142 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 FIS1Q9Y3D6 152 aa8.79□□□□□ -1
SCFD1-220ENST00000556486 NPIPA5A0A0B4J1W7 369 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 A0A1W2PR80 420 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 CCDC154A6NI56 674 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 OR5H1A6NKK0 313 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 C9JVG2 144 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 NPIPA7E9PJI5 369 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 GTPBP1O00178 669 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 PEX11AO75192 247 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 STX11O75558 287 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 C6orf47O95873 294 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 NPIPA8P0DM63 369 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 GGT1P19440 569 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 USF1P22415 310 aaPredicted RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 IGHV1-2P23083 117 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 EDNRAP25101 427 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 FKBP2P26885 142 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 ALDH3A1P30838 453 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 ARRB2P32121 409 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 CLK1P49759 484 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 DIO1P49895 249 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 CSNK2A1P68400 391 aaPredicted RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 RASGEF1BQ0VAM2 473 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 TRIM25Q14258 630 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 PPA1Q15181 289 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 RAB35Q15286 201 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 CNN3Q15417 329 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 NDUFAF6Q330K2 333 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 ARHGAP11BQ3KRB8 267 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 TIGD2Q4W5G0 525 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 SYT14P1Q58G82 188 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 AGAP6Q5VW22 663 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 IL23RQ5VWK5 629 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 TMPPEQ6ZT21 453 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 GALNT5Q7Z7M9 940 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 MEX3DQ86XN8 651 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 LYSMD2Q8IV50 215 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 GSPT2Q8IYD1 628 aaKnown RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 ZNF433Q8N7K0 673 aaPredicted RBP8.78□□□□□ -1
SCFD1-220ENST00000556486 OR8J2Q8NGG1 315 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 TMEM234Q8WY98 164 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 MUCL1Q96DR8 90 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 C3orf30Q96M34 536 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 OR7D2Q96RA2 312 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 SOX7Q9BT81 388 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 SERHL2Q9H4I8 314 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 POLE3Q9NRF9 147 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 ACER3Q9NUN7 267 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 EMC3Q9P0I2 261 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 MALT1Q9UDY8 824 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 LGALS13Q9UHV8 139 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 POU2F3Q9UKI9 436 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 GTF2A1LQ9UNN4 478 aa8.78□□□□□ -1
SCFD1-220ENST00000556486 ZNF716A6NP11 495 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 E7EQL1 145 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 RNASET2O00584 256 aaKnown RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 TCF21O43680 179 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 FCMRO60667 390 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 UGT2B17O75795 530 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 AGR2O95994 175 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 TGFAP01135 160 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 NUDT17P0C025 328 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 PGCP20142 388 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 HNF1AP20823 631 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms