RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 FRS3O43559 492 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 HEXAP06865 529 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 ETS2P15036 469 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 ATP4BP51164 291 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 IRX1P78414 480 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 GABRA6Q16445 453 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 AGKQ53H12 422 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 PAGE3Q5JUK9 113 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 GCNT6Q5T4J0 391 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 TSPO2Q5TGU0 170 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 C1orf140Q5VVS0 124 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 NFKBIDQ8NI38 313 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 STK35Q8TDR2 534 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 SLC35B4Q969S0 331 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 TMEM45BQ96B21 275 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 TRMT61AQ96FX7 289 aaKnown RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 MUS81Q96NY9 551 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 SF3B5Q9BWJ5 86 aaKnown RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 PIF1Q9H611 641 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 SLC52A3Q9NQ40 469 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 SLC7A10Q9NS82 523 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 SLAMF8Q9P0V8 285 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
PCNX4-209ENST00000555569 MAGED1Q9Y5V3 778 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-209ENST00000555569 FN1P02751 2386 aaKnown RBP12.14□□□□□ -0.47
PCNX4-209ENST00000555569 ALPK2Q86TB3 2170 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
PCNX4-209ENST00000555569 TMEM229AB2RXF0 380 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 ABCD4O14678 606 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 NPIPB7O75200 414 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 LY6G6DO95868 133 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 ARAFP10398 606 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 PTAFRP25105 342 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 ZNF83P51522 516 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 CDH11P55287 796 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 HOXC5Q00444 222 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 SQLEQ14534 574 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 PGGHGQ32M88 737 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 C9orf135Q5VTT2 229 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 TMEM225Q6GV28 225 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 KLHL17Q6TDP4 642 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 AAED1Q7RTV5 226 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 HDXQ7Z353 690 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 ZIC4Q8N9L1 334 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 GTPBP3Q969Y2 492 aaKnown RBP12.14□□□□□ -0.47
PCNX4-209ENST00000555569 RADILQ96JH8 1075 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 AMBRA1Q9C0C7 1298 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 TMEM45AQ9NWC5 275 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 ADPRHL2Q9NX46 363 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 VAPAQ9P0L0 249 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 MGAT4BQ9UQ53 548 aa12.14□□□□□ -0.47
PCNX4-209ENST00000555569 HIVEP2P31629 2446 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 TRBV5-3A0A0A0MS03 114 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 A0A1W2PR80 420 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 AHSA1O95433 338 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 MPGP29372 298 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 PRKAR1BP31321 381 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 CDKN1AP38936 164 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 P2RY4P51582 365 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 CDK6Q00534 326 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 TGFBR3Q03167 851 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 REEP3Q6NUK4 255 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 GPAT4Q86UL3 456 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 KRT73Q86Y46 540 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 C10orf111Q8N326 155 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 POMGNT2Q8NAT1 580 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 C1orf162Q8NEQ5 155 aaPredicted RBP12.13□□□□□ -0.47
PCNX4-209ENST00000555569 CKAP2Q8WWK9 683 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
PCNX4-209ENST00000555569 TRAF4Q9BUZ4 470 aaPredicted RBP12.13□□□□□ -0.47
PCNX4-209ENST00000555569 SPATA5L1Q9BVQ7 753 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 SLCO5A1Q9H2Y9 848 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 ALG2Q9H553 416 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 RPS6KB2Q9UBS0 482 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 CORO2BQ9UQ03 480 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 GMEB1Q9Y692 573 aa12.13□□□□□ -0.47
PCNX4-209ENST00000555569 ELOA3DA6NLF2 546 aaPredicted RBP12.12□□□□□ -0.47
PCNX4-209ENST00000555569 EVPLLA8MZ36 301 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 M0R1B8 84 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 VAMP5O95183 116 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 CD8AP01732 235 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 CD40P25942 277 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 ETFDHQ16134 617 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 ELOA3BQ3SY89 546 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 DHRS4L2Q6PKH6 230 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 SLC22A25Q6T423 547 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 ABHD12BQ7Z5M8 362 aaPredicted RBP12.12□□□□□ -0.47
PCNX4-209ENST00000555569 ELOA3Q8NG57 546 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms