RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FTCDNL1E5RQL4 147 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 M0QX08 132 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 M0R3H8 397 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 CRYBA2P53672 197 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 MAPRE2Q15555 327 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 TAB1Q15750 504 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 VMACQ2NL98 169 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 ELOA3BQ3SY89 546 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 BEX5Q5H9J7 111 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 FBXW9Q5XUX1 488 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 SEZ6L2Q6UXD5 910 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 CASP12Q6UXS9 341 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 CALHM3Q86XJ0 350 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 POU5F2Q8N7G0 328 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 BHLHE22Q8NFJ8 381 aaPredicted RBP18.11■□□□□ 0.49
VTI1B-205ENST00000555543 ELOA3Q8NG57 546 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 TAMM41Q96BW9 452 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 FOXC2Q99958 501 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 TAPBPLQ9BX59 468 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 TRIM2Q9C040 744 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 C12orf10Q9HB07 376 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 MRPL33O75394 65 aaKnown RBP18.1■□□□□ 0.49
VTI1B-205ENST00000555543 AHSA1O95433 338 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 CNOT4O95628 575 aaKnown RBP18.1■□□□□ 0.49
VTI1B-205ENST00000555543 CD53P19397 219 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 CD247P20963 164 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 RPS5P46782 204 aaKnown RBP18.1■□□□□ 0.49
VTI1B-205ENST00000555543 FOXG1P55316 489 aaPredicted RBP18.1■□□□□ 0.49
VTI1B-205ENST00000555543 NCALDP61601 193 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 KEAP1Q14145 624 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 OR1Q1Q15612 314 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 NPTX1Q15818 432 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 NRF1Q16656 503 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 ALG10BQ5I7T1 473 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 P3H2Q8IVL5 708 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 UBE2J2Q8N2K1 259 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 ZIC4Q8N9L1 334 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 OR9K2Q8NGE7 335 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 OR8J3Q8NGG0 315 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 PLPPR2Q96GM1 343 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 ZNF385AQ96PM9 386 aaKnown RBP18.1■□□□□ 0.49
VTI1B-205ENST00000555543 ARHGDIGQ99819 225 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 CXXC4Q9H2H0 198 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 SEC14L4Q9UDX3 406 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 MALT1Q9UDY8 824 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 SLC13A4Q9UKG4 626 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 SLC9A8Q9Y2E8 581 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 ROS1P08922 2347 aa18.1■□□□□ 0.49
VTI1B-205ENST00000555543 PRRC2AP48634 2157 aaKnown RBP18.1■□□□□ 0.49
VTI1B-205ENST00000555543 A0A0B4J2E0 115 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 A0A1B0GX12 115 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 LGI1O95970 557 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 PLAUP00749 431 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 PTNP21246 168 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 PATL1Q86TB9 770 aaKnown RBP18.09■□□□□ 0.49
VTI1B-205ENST00000555543 GPAT4Q86UL3 456 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 SLC30A8Q8IWU4 369 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 ZNF433Q8N7K0 673 aaPredicted RBP18.09■□□□□ 0.49
VTI1B-205ENST00000555543 OR4D11Q8NGI4 311 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 MFSD8Q8NHS3 518 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 DNAJA4Q8WW22 397 aaPredicted RBP18.09■□□□□ 0.49
VTI1B-205ENST00000555543 SLC25A36Q96CQ1 311 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 RCN3Q96D15 328 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 MBD6Q96DN6 1003 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 SF3B5Q9BWJ5 86 aaKnown RBP18.09■□□□□ 0.49
VTI1B-205ENST00000555543 UBTD1Q9HAC8 227 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 FAM53CQ9NYF3 392 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 EDARQ9UNE0 448 aa18.09■□□□□ 0.49
VTI1B-205ENST00000555543 RAI1Q7Z5J4 1906 aaPredicted RBP18.09■□□□□ 0.49
VTI1B-205ENST00000555543 ZNF469Q96JG9 3925 aaPredicted RBP18.09■□□□□ 0.49
VTI1B-205ENST00000555543 SLC22A2O15244 555 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 FZD7O75084 574 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 NPPAP01160 153 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 PNMTP11086 282 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 SEC24CP53992 1094 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 STK11Q15831 433 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 FAM91A1Q658Y4 838 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 ULK3Q6PHR2 472 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 RANBP3LQ86VV4 465 aaPredicted RBP18.08■□□□□ 0.48
VTI1B-205ENST00000555543 RBM45Q8IUH3 476 aaKnown RBP18.08■□□□□ 0.48
VTI1B-205ENST00000555543 OR6T1Q8NGN1 323 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 HSD17B8Q92506 261 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 SLC38A4Q969I6 547 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 TAAR8Q969N4 342 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 TMEM45BQ96B21 275 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 ALPK1Q96QP1 1244 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 SLC7A10Q9NS82 523 aa18.08■□□□□ 0.48
VTI1B-205ENST00000555543 PDLIM1O00151 329 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 RAD51DO75771 328 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 ITGA5P08648 1049 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 NR1H2P55055 460 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 CDH12P55289 794 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 FAPQ12884 760 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 DEFB113Q30KQ7 82 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 INTS11Q5TA45 600 aaKnown RBP18.07■□□□□ 0.48
VTI1B-205ENST00000555543 TSPO2Q5TGU0 170 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 ZNF704Q6ZNC4 412 aaPredicted RBP18.07■□□□□ 0.48
VTI1B-205ENST00000555543 CCDC80Q76M96 950 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 TSPYL5Q86VY4 417 aaPredicted RBP18.07■□□□□ 0.48
VTI1B-205ENST00000555543 PCYOX1LQ8NBM8 494 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms