RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FRMPD3Q5JV73 1810 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 A0A0G2JRQ6 117 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 ZFP92A6NM28 416 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 HAS3O00219 553 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 HAT1O14929 419 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 TOM1O60784 492 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 LGI1O95970 557 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 KLK3P07288 261 aaPredicted RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 CD1CP29017 333 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 IL12AP29459 219 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 BTDP43251 543 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 TNNT2P45379 298 aaPredicted RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 GYG1P46976 350 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 GSSP48637 474 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 CRYBB1P53674 252 aaPredicted RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 CSNK1G2P78368 415 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 VGLL4Q14135 290 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 C6orf226Q5I0X4 101 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 GPRC6AQ5T6X5 926 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 ENPP6Q6UWR7 440 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 ZYG11AQ6WRX3 759 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 H2BFWTQ7Z2G1 175 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 ZNF571Q7Z3V5 609 aaPredicted RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 FAM220AQ7Z4H9 259 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 OR2AP1Q8NGE2 309 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.89□□□□□ -1.79
VRK1-205ENST00000555402 FAM122AQ96E09 287 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 PAGE5Q96GU1 130 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 B3GALT6Q96L58 329 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 PLIN2Q99541 437 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 EBF4Q9BQW3 602 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 MRPL45Q9BRJ2 306 aaKnown RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 POLR2J2Q9GZM3 115 aaKnown RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 POLR2J3Q9H1A7 115 aaKnown RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 PPA2Q9H2U2 334 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 SUDS3Q9H7L9 328 aaPredicted RBP3.89□□□□□ -1.79
VRK1-205ENST00000555402 MARCH5Q9NX47 278 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 UGT2A1Q9Y4X1 527 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 SH3TC1Q8TE82 1336 aa3.89□□□□□ -1.79
VRK1-205ENST00000555402 LRRK1Q38SD2 2015 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 A0A0U1RQS6 177 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 EPOPA6NHQ4 379 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 E7ENQ6 273 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 SNAPINO95295 136 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 IGKV3-15P01624 115 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 UQCRFS1P1P0C7P4 283 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 ZNF853P0CG23 659 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 SFTPCP11686 197 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 ETS2P15036 469 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 STX17P56962 302 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 SELENOTP62341 195 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 EGFEM1PQ0D2K5 195 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 MICBQ29980 383 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 PARP15Q460N3 678 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 CARD16Q5EG05 197 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
VRK1-205ENST00000555402 TIGD3Q6B0B8 471 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 Q6ZN92 141 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 FAM228AQ86W67 206 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 NUDCD3Q8IVD9 361 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 CEND1Q8N111 149 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 ACOT4Q8N9L9 421 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 BBS1Q8NFJ9 593 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 OR56B2PQ8NGI1 322 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 FAM110BQ8TC76 370 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 OR1E3Q8WZA6 343 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 C16orf74Q96GX8 76 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 NAT9Q9BTE0 207 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 SELENOIQ9C0D9 397 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 ACTR6Q9GZN1 396 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 NMRAL1Q9HBL8 299 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 KCNIP3Q9Y2W7 256 aa3.88□□□□□ -1.79
VRK1-205ENST00000555402 A6NIZ1 184 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 IGHV3-48P01763 117 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 ATP1B2P14415 290 aaPredicted RBP3.87□□□□□ -1.79
VRK1-205ENST00000555402 CASQ1P31415 396 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 DDOSTP39656 456 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 KRTAP10-1P60331 282 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 RAP1BP61224 184 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 OR5I1Q13606 314 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 ARFRP1Q13795 201 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 BCL7AQ4VC05 210 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 KLF17Q5JT82 389 aaPredicted RBP3.87□□□□□ -1.79
VRK1-205ENST00000555402 MARCH8Q5T0T0 291 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 OR2G6Q5TZ20 316 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 C1orf146Q5VVC0 180 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 LRRC31Q6UY01 552 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 SLC26A11Q86WA9 606 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 EGFL6Q8IUX8 553 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 DNAJA4Q8WW22 397 aaPredicted RBP3.87□□□□□ -1.79
VRK1-205ENST00000555402 NUS1Q96E22 293 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 CMTM7Q96FZ5 175 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 PANX2Q96RD6 677 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 HIST1H4GQ99525 98 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 CCDC77Q9BR77 488 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 RIOK1Q9BRS2 568 aaKnown RBP3.87□□□□□ -1.79
VRK1-205ENST00000555402 NARFLQ9H6Q4 476 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 VPS37BQ9H9H4 285 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 SLC2A8Q9NY64 477 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms