RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 DBIP07108 87 aaKnown RBP12.23□□□□□ -0.45
XRCC3-207ENST00000554774 RPS4Y1P22090 263 aaKnown RBP12.23□□□□□ -0.45
XRCC3-207ENST00000554774 CDKN2CP42773 168 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 UFM1P61960 85 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 SNRPD2P62316 118 aaKnown RBP12.23□□□□□ -0.45
XRCC3-207ENST00000554774 CARTPTQ16568 116 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 GSTA3Q16772 222 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 MST1LQ2TV78 715 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 KRTAP24-1Q3LI83 254 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 COX20Q5RI15 118 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 C1QTNF12Q5T7M4 302 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 IL17RELQ6ZVW7 336 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 ABHD12BQ7Z5M8 362 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-207ENST00000554774 C3orf49Q96BT1 292 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 SORCS2Q96PQ0 1159 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 SORT1Q99523 831 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 SF3B5Q9BWJ5 86 aaKnown RBP12.23□□□□□ -0.45
XRCC3-207ENST00000554774 TAPBPLQ9BX59 468 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 ADAM19Q9H013 955 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 TMEM45AQ9NWC5 275 aa12.23□□□□□ -0.45
XRCC3-207ENST00000554774 IGHV1-18A0A0C4DH31 117 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 LOC100289279A0A1B0GTE1 492 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 AQP7P3A6NL99 342 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 VWC2LB2RUY7 222 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 NDUFS8O00217 210 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 SNUPNO95149 360 aaKnown RBP12.22□□□□□ -0.45
XRCC3-207ENST00000554774 LGI1O95970 557 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 ALDOCP09972 364 aaKnown RBP12.22□□□□□ -0.45
XRCC3-207ENST00000554774 GKN3PP0CG01 181 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 SRD5A1P18405 259 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 BGNP21810 368 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 IGFBP5P24593 272 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 NR4A2P43354 598 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 TXNL4AP83876 142 aaKnown RBP12.22□□□□□ -0.45
XRCC3-207ENST00000554774 BNIP2Q12982 314 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 TBRG1Q3YBR2 411 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 TMEM225Q6GV28 225 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 FAM166AQ6J272 317 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 SLC46A3Q7Z3Q1 461 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 SPATA19Q7Z5L4 167 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 PEX5LQ8IYB4 626 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 ZNF440Q8IYI8 595 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 LRRC34Q8IZ02 419 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 CADM2Q8N3J6 435 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 ANKS4BQ8N8V4 417 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 AENQ8WTP8 325 aaKnown RBP12.22□□□□□ -0.45
XRCC3-207ENST00000554774 SLC38A2Q96QD8 506 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 OR52E6Q96RD3 313 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 VRK1Q99986 396 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-207ENST00000554774 MEAF6Q9HAF1 191 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 OBP2BQ9NPH6 170 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 PNPOQ9NVS9 261 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 RLIMQ9NVW2 624 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 ADPRHL2Q9NX46 363 aa12.22□□□□□ -0.45
XRCC3-207ENST00000554774 SLC35F4A4IF30 521 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 ZNF587BE7ETH6 402 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-207ENST00000554774 CRYAAP02489 173 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 PGRP06401 933 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 APEHP13798 732 aaKnown RBP12.21□□□□□ -0.45
XRCC3-207ENST00000554774 IL12AP29459 219 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 SERPINF1P36955 418 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 SELENOPP49908 381 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 UBE2NP61088 152 aaKnown RBP12.21□□□□□ -0.45
XRCC3-207ENST00000554774 COPZ1P61923 177 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 LGALS3BPQ08380 585 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 STX3Q13277 289 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 IQCCQ4KMZ1 466 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 LIN52Q52LA3 116 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 OGFOD2Q6N063 350 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 VHLLQ6RSH7 139 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 ZNF836Q6ZNA1 936 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 VRK2Q86Y07 508 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 OR52P1PQ8NH57 321 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 TRIM44Q96DX7 344 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-207ENST00000554774 FOXN4Q96NZ1 517 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-207ENST00000554774 TMEM109Q9BVC6 243 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 PIF1Q9H611 641 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 CA10Q9NS85 328 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 AIG1Q9NVV5 245 aa12.21□□□□□ -0.45
XRCC3-207ENST00000554774 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.2□□□□□ -0.468e-10■■□□□ 11.7
XRCC3-207ENST00000554774 IGHV4-61A0A0C4DH41 118 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 LOC390937A0A1W2PQ73 354 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 CDHR4A6H8M9 788 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 A8MVM7 634 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 B9A039 149 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 NR5A2O00482 541 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 TM9SF1O15321 606 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 FRS3O43559 492 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 KRT75O95678 551 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
XRCC3-207ENST00000554774 ACAA2P42765 397 aaKnown RBP12.2□□□□□ -0.46
XRCC3-207ENST00000554774 TUBA1BP68363 451 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 TUBA4AP68366 448 aa12.2□□□□□ -0.46
XRCC3-207ENST00000554774 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms