RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 NOXRED1Q6NXP6 359 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 APOOLQ6UXV4 268 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 THAP5Q7Z6K1 395 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 HIPK1Q86Z02 1210 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 CLVS1Q8IUQ0 354 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 MISPQ8IVT2 679 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 COX18Q8N8Q8 333 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 ATP6V1C2Q8NEY4 427 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 NUP43Q8NFH3 380 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 B4GALNT2Q8NHY0 566 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 MAGEE2Q8TD90 523 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 ABHD3Q8WU67 409 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 ROBO4Q8WZ75 1007 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 HDAC2Q92769 488 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 OSTF1Q92882 214 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 CIDECQ96AQ7 238 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 PPCDCQ96CD2 204 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 C11orf24Q96F05 449 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 ZBED6CLQ96FA7 236 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 OTUB1Q96FW1 271 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 METTL2AQ96IZ6 378 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 KLHL15Q96M94 604 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 MS4A4EQ96PG1 132 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 NPAS1Q99742 590 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 RBM4BQ9BQ04 359 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 THUMPD3Q9BV44 507 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 RBM4Q9BWF3 364 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 OR10A4Q9H209 315 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 ESRP2Q9H6T0 727 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 TIGARQ9NQ88 270 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 TBCCD1Q9NVR7 557 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 FBXO34Q9NWN3 711 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 SIRT5Q9NXA8 310 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 TAS2R7Q9NYW3 318 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 SH3BP4Q9P0V3 963 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 PCDHGB4Q9UN71 923 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 FAF1Q9UNN5 650 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 WBP11Q9Y2W2 641 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 TMED5Q9Y3A6 229 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 PCDHGB5Q9Y5G0 923 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 RAI1Q7Z5J4 1906 aaPredicted RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 USF3Q68DE3 2245 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 TLN2Q9Y4G6 2542 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 HEATR5AQ86XA9 2040 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 A0A0J9YW62 118 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ELOVL7A1L3X0 281 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 GJE1A6NN92 205 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 NPIPB8E9PQR5 432 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 G3V2T6 193 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 GNGT2O14610 69 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ANKRD28O15084 1053 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 LSM1O15116 133 aaKnown RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 ADAMDEC1O15204 470 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 PFDN1O60925 122 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 NKX2-2O95096 273 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 NTN1O95631 604 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 IFNA2P01563 188 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ALOX5P09917 674 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 THRBP10828 461 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 G6PDP11413 515 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 IL11P20809 199 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 IL12AP29459 219 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ARHGDIAP52565 204 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 CLDN8P56748 225 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 CSNK2BP67870 215 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 FOXF1Q12946 379 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 KIAA0040Q15053 153 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 RNPS1Q15287 305 aaKnown RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 STK11Q15831 433 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ZNF239Q16600 458 aaKnown RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 MOGQ16653 247 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ZNF829Q3KNS6 432 aaPredicted RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 TIGD2Q4W5G0 525 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 RABL3Q5HYI8 236 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 CCNJQ5T5M9 372 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 HEPHL1Q6MZM0 1159 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 MFSD12Q6NUT3 480 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ZNF773Q6PK81 442 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 TUSC5Q8IXB3 177 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 C8orf59Q8N0T1 100 aaPredicted RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 ZNF614Q8N883 585 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 OR2T12Q8NG77 320 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 OR4C3Q8NH37 302 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 OR5K1Q8NHB7 308 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 PHOSPHO1Q8TCT1 267 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 SMAP2Q8WU79 429 aaPredicted RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 IGFBPL1Q8WX77 278 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 KISS1RQ969F8 398 aaPredicted RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 CPNE4Q96A23 557 aaPredicted RBP7.86□□□□□ -1.15
TDP1-208ENST00000553989 ITCHQ96J02 903 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ADGRG7Q96K78 797 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 EGLN2Q96KS0 407 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 HS6ST2Q96MM7 605 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ZNF583Q96ND8 569 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 TSSK3Q96PN8 268 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 BCL7BQ9BQE9 202 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 TMEM204Q9BSN7 226 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 C1orf50Q9BV19 199 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 HDHD5Q9BXW7 423 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 REG4Q9BYZ8 158 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms