RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 YES1P07947 543 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PNMTP11086 282 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 POU2F1P14859 743 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 IL11P20809 199 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 DRD4P21917 467 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PRDX6P30041 224 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PCGF2P35227 344 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 IDUAP35475 653 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 DIO1P49895 249 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 DLX5P56178 289 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 SLC35A1P78382 337 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 MXRA7P84157 204 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 SORDQ00796 357 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 RASGEF1BQ0VAM2 473 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 CDK5R2Q13319 367 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 CDSNQ15517 529 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 MAPK11Q15759 364 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 VMACQ2NL98 169 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 CTU2Q2VPK5 515 aaKnown RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 SLC35F1Q5T1Q4 408 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 GKAP1Q5VSY0 366 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 C5orf46Q6UWT4 87 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PLXDC2Q6UX71 529 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 BEND4Q6ZU67 534 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 POU5F2Q8N7G0 328 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 ANKS4BQ8N8V4 417 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 OR2T12Q8NG77 320 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 OR52E4Q8NGH9 312 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PIGXQ8TBF5 258 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 DNAJA4Q8WW22 397 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PROX1Q92786 737 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 NPAS1Q99742 590 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 CCDC106Q9BWC9 280 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 TRIM8Q9BZR9 551 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 IKZF5Q9H5V7 419 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 ELOVL5Q9NYP7 299 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 C6orf203Q9P0P8 240 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 TMEM181Q9P2C4 612 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 TESQ9UGI8 421 aaKnown RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 OSGIN1Q9UJX0 560 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 BAG5Q9UL15 447 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 CLEC4AQ9UMR7 237 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 TRAPPC4Q9Y296 219 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 SLC9A8Q9Y2E8 581 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 TEX15Q9BXT5 2789 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 NUP214P35658 2090 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 NCKAP5O14513 1909 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 RELNP78509 3460 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 MYO9AB2RTY4 2548 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 TMEM72A0PK05 275 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 A8MXE2 369 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 BCAS1O75363 584 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-209ENST00000553855 TNFSF13O75888 250 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 IGHA1P01876 353 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 GPIP06744 558 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 FESP07332 822 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 C8BP07358 591 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 CD8BP10966 210 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 NOS3P29474 1203 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 CD79BP40259 229 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 ECI1P42126 302 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 NUDT2P50583 147 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 MNAT1P51948 309 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 TFF3Q07654 80 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 VEZF1Q14119 521 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 SELPLGQ14242 412 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 EXOC3L2Q2M3D2 409 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 RABL3Q5HYI8 236 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 VWA1Q6PCB0 445 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 ULK3Q6PHR2 472 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 NET1Q7Z628 596 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-209ENST00000553855 TMEM200AQ86VY9 491 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 ADGRG3Q86Y34 549 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 ZZZ3Q8IYH5 903 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF100Q8IYN0 542 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 SMYD1Q8NB12 490 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 RNF128Q8TEB7 428 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 FAM222BQ8WU58 562 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 WFDC12Q8WWY7 111 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 LZICQ8WZA0 190 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 STARD4Q96DR4 205 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 SLC47A1Q96FL8 570 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 LRRC37BQ96QE4 947 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 EPYCQ99645 322 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 KLHDC3Q9BQ90 382 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 SRXN1Q9BYN0 137 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 POTEKPQ9BYX7 375 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 OPN3Q9H1Y3 402 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-209ENST00000553855 COQ10BQ9H8M1 238 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 C12orf10Q9HB07 376 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 ADPRHL2Q9NX46 363 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 NDE1Q9NXR1 346 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 GALNT8Q9NY28 637 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 KLHL13Q9P2N7 655 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 EDARQ9UNE0 448 aa7.44□□□□□ -1.22
PSEN1-209ENST00000553855 USP9YO00507 2555 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-209ENST00000553855 IGHV3-15A0A0B4J1V0 119 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 ELOVL7A1L3X0 281 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 FAM220BPB1ANY3 271 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 C16orf97H3BN30 126 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms