RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 RBM45Q8IUH3 476 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 DMRTC2Q8IXT2 367 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 DEFB107AQ8IZN7 70 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 RBM15BQ8NDT2 890 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 MFSD8Q8NHS3 518 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 GEMIN6Q8WXD5 167 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 FAM162AQ96A26 154 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 DNAJA3Q96EY1 480 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 NSL1Q96IY1 281 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 TPD52L3Q96J77 140 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 EPYCQ99645 322 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 NAA11Q9BSU3 229 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 TMEM43Q9BTV4 400 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 PTDSS2Q9BVG9 487 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 PRR14Q9BWN1 585 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 TAPBPLQ9BX59 468 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 OPN3Q9H1Y3 402 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 PLSCR4Q9NRQ2 329 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 ING1Q9UK53 422 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 SH3GLB1Q9Y371 365 aa10.43□□□□□ -0.74
TRAFD1-209ENST00000552896 TRAV36DV7A0A075B6V5 113 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ZNF814B7Z6K7 855 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 FTCDNL1E5RQL4 147 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 GPR171O14626 319 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 OR2T1O43869 369 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 OR5F1O95221 314 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 LYPD3O95274 346 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ZNF682O95780 498 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 SERPINA1P01009 418 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 TNFRSF1BP20333 461 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 FPR1P21462 350 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 RPS5P46782 204 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 CEACAM7Q14002 265 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 OTUD3Q5T2D3 398 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 TFAP2EQ6VUC0 442 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 LINC00114Q6XXX2 140 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 DEF8Q6ZN54 512 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 STK32CQ86UX6 486 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 TSPYL5Q86VY4 417 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 LSRQ86X29 649 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 TUSC5Q8IXB3 177 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ARHGAP24Q8N264 748 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 OR6S1Q8NH40 331 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 KTI12Q96EK9 354 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 MPP4Q96JB8 637 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 HSH2DQ96JZ2 352 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ZNF300Q96RE9 604 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ZNF426Q9BUY5 554 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 SLC19A3Q9BZV2 496 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ELOVL5Q9NYP7 299 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 CD300AQ9UGN4 299 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 RPS6KA6Q9UK32 745 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 SLC7A7Q9UM01 511 aa10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 ANKRD17O75179 2603 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-209ENST00000552896 B2RBV5 119 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 ARPC2O15144 300 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 GMNNO75496 209 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 AKR7A3O95154 331 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 THY1P04216 161 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 IFNW1P05000 195 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 T-ENOLP0DO92 83 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 THRBP10828 461 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 NCK1P16333 377 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 GTF2E2P29084 291 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 CCKARP32238 428 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 CD79BP40259 229 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 OR1E2P47887 323 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 P2RY4P51582 365 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 TAS2R41P59536 307 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 MFSD13AQ14CX5 517 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 IFI44LQ53G44 452 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 ZNF474Q6S9Z5 364 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 WDR88Q6ZMY6 472 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 VTCN1Q7Z7D3 282 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 GALNT5Q7Z7M9 940 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 RNF148Q8N7C7 305 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 ADPRHL1Q8NDY3 354 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 RNF217Q8TC41 542 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 SLC41A3Q96GZ6 507 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 PRRC1Q96M27 445 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 CDRT15Q96T59 188 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 SF3B5Q9BWJ5 86 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 C1orf21Q9H246 121 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 C12orf49Q9H741 205 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 GORASP2Q9H8Y8 452 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 FANCFQ9NPI8 374 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 KCNN3Q9UGI6 736 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 EGFL7Q9UHF1 273 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 SAMD4AQ9UPU9 718 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 SNX13Q9Y5W8 968 aa10.41□□□□□ -0.74
TRAFD1-209ENST00000552896 LRBAP50851 2863 aa10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 RAMP1O60894 148 aa10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 VAMP5O95183 116 aa10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 MT-ATP6P00846 226 aa10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 POU2F1P14859 743 aa10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 TCN1P20061 433 aaPredicted RBP10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 RBM34P42696 430 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 OR3A2P47893 321 aa10.4□□□□□ -0.74
TRAFD1-209ENST00000552896 SLC17A1Q14916 467 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms