RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 GAAP10253 952 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 ADRA2CP18825 462 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TCN1P20061 433 aaPredicted RBP7.3□□□□□ -1.24
CDK4-213ENST00000552713 SELENOPP49908 381 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 KHKP50053 298 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 LMO4P61968 165 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 SLC35A1P78382 337 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 SPDYE7PQ495Y7 208 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 OTUD3Q5T2D3 398 aaPredicted RBP7.3□□□□□ -1.24
CDK4-213ENST00000552713 EMBQ6PCB8 327 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 ZYG11AQ6WRX3 759 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 EIF3MQ7L2H7 374 aaKnown RBP7.3□□□□□ -1.24
CDK4-213ENST00000552713 GRINAQ7Z429 371 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 KRTCAP2Q8N6L1 136 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 OR4F15Q8NGB8 312 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 OR9K2Q8NGE7 335 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 OR5P2Q8WZ92 322 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TAF15Q92804 592 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDK4-213ENST00000552713 YIPF5Q969M3 257 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 MTERF3Q96E29 417 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 ALKBH3Q96Q83 286 aaPredicted RBP7.3□□□□□ -1.24
CDK4-213ENST00000552713 ZNF350Q9GZX5 532 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TSPYL1Q9H0U9 437 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 ZNF442Q9H7R0 627 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 DYNLRB1Q9NP97 96 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 OBP2BQ9NPH6 170 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 G6PC2Q9NQR9 355 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TMEM45AQ9NWC5 275 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 OSGIN1Q9UJX0 560 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TRAPPC4Q9Y296 219 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TMED7Q9Y3B3 224 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 GRIP1Q9Y3R0 1128 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 DOCK11Q5JSL3 2073 aa7.3□□□□□ -1.24
CDK4-213ENST00000552713 TMEM233B4DJY2 109 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 ANKRD28O15084 1053 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 STX11O75558 287 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 PNPP00491 289 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 IGKV3-15P01624 115 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 C1QCP02747 245 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 PROCP04070 461 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 SAGP10523 405 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 MYL2P10916 166 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 MATN1P21941 496 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 GPR6P46095 362 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 LIMS1P48059 325 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 IDH2P48735 452 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 CLK1P49759 484 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 P2RY4P51582 365 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 SEC24CP53992 1094 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 UBE2NP61088 152 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 UBA52P62987 128 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 HBA1P69905 142 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 FUT5Q11128 374 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 PTGR1Q14914 329 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 PDCD2Q16342 344 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 ARHGAP11BQ3KRB8 267 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 C1QTNF12Q5T7M4 302 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 TYW3Q6IPR3 259 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 KRT80Q6KB66 452 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 PAQR6Q6TCH4 344 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 UGT2A3Q6UWM9 527 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 R3HCC1LQ7Z5L2 792 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 POMGNT2Q8NAT1 580 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 SFXN5Q8TD22 340 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 MZB1Q8WU39 189 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 C22orf15Q8WYQ4 148 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 CNOT9Q92600 299 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 ZNF837Q96EG3 531 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 NAA11Q9BSU3 229 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 TMPRSS13Q9BYE2 586 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 MRPL37Q9BZE1 423 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 ZNF275Q9NSD4 429 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 MYEF2Q9P2K5 600 aaKnown RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 TBK1Q9UHD2 729 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 PPIAL4AQ9Y536 164 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 DNAJC15Q9Y5T4 150 aa7.29□□□□□ -1.24
CDK4-213ENST00000552713 SPIN1Q9Y657 262 aaPredicted RBP7.29□□□□□ -1.24
CDK4-213ENST00000552713 TANC2Q9HCD6 1990 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 CMYA5Q8N3K9 4069 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 A0A1W2PPM1 405 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 PRAMEF27A3QJZ7 478 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 LIPT2A6NK58 231 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 ZNF587BE7ETH6 402 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 AZIN1O14977 448 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 RIPK2O43353 540 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 EIF1BO60739 113 aaKnown RBP7.28□□□□□ -1.24
CDK4-213ENST00000552713 NCR1O76036 304 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 ERCC1P07992 297 aaPredicted RBP7.28□□□□□ -1.24
CDK4-213ENST00000552713 KRT16P08779 473 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 HKR1P10072 659 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 CBR1P16152 277 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 TACR3P29371 465 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 SOAT1P35610 550 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 HPCAL1P37235 193 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 ALDH3B1P43353 468 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 NPRL3Q12980 569 aa7.28□□□□□ -1.24
CDK4-213ENST00000552713 SNTB2Q13425 540 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms