RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ANKFN1Q8N957 763 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 PPP1R36Q96LQ0 422 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 PIMREGQ9BSJ6 248 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 KATNB1Q9BVA0 655 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 SSU72Q9NP77 194 aaKnown RBP11.22□□□□□ -0.61
PTCH1-221ENST00000550914 TMEM45AQ9NWC5 275 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 KCNS2Q9ULS6 477 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 MOKQ9UQ07 419 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 LOC390937A0A1W2PQ73 354 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 CCDC154A6NI56 674 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 SRD5A1P18405 259 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 CXCR1P25024 350 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 SERPINF1P36955 418 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 CEACAM7Q14002 265 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 CHI3L2Q15782 390 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 ZSWIM7Q19AV6 140 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 KRTAP24-1Q3LI83 254 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 HIKESHIQ53FT3 197 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 MRPL2Q5T653 305 aaKnown RBP11.21□□□□□ -0.61
PTCH1-221ENST00000550914 PEX5LQ8IYB4 626 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 TMEM99Q8N816 258 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 FAM169BQ8N8A8 192 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF540Q8NDQ6 660 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-221ENST00000550914 FBXO17Q96EF6 278 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 PKNOX2Q96KN3 472 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF385AQ96PM9 386 aaKnown RBP11.21□□□□□ -0.61
PTCH1-221ENST00000550914 SORCS2Q96PQ0 1159 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 SLC38A2Q96QD8 506 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 PANX1Q96RD7 426 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 SORT1Q99523 831 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 MEAF6Q9HAF1 191 aa11.21□□□□□ -0.61
PTCH1-221ENST00000550914 CRNNQ9UBG3 495 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-221ENST00000550914 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.62
PTCH1-221ENST00000550914 DSPPQ9NZW4 1301 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 A0A096LPI6 279 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 IGHV1-18A0A0C4DH31 117 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 CDHR4A6H8M9 788 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 A8MVM7 634 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 B9A039 149 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF587BE7ETH6 402 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 TM9SF1O15321 606 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 LY6HO94772 140 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 AKR7A3O95154 331 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 KRT75O95678 551 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 CRYAAP02489 173 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 PGRP06401 933 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 NR2F1P10589 423 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-221ENST00000550914 HNF1AP20823 631 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 IGFBP5P24593 272 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 SLC1A6P48664 564 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 P2RY4P51582 365 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 SH3BGRP55822 239 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-221ENST00000550914 GGTLC2Q14390 218 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 OR7A5Q15622 319 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 EFNB3Q15768 340 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 TBRG1Q3YBR2 411 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 TMEM225Q6GV28 225 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 WBP2NLQ6ICG8 309 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 ANKK1Q8NFD2 765 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 OR1K1Q8NGR3 316 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 AENQ8WTP8 325 aaKnown RBP11.2□□□□□ -0.62
PTCH1-221ENST00000550914 AURKBQ96GD4 344 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-221ENST00000550914 PRR14Q9BWN1 585 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 TAPBPLQ9BX59 468 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 C20orf27Q9GZN8 174 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 CA10Q9NS85 328 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 CALML5Q9NZT1 146 aa11.2□□□□□ -0.62
PTCH1-221ENST00000550914 LOC100289279A0A1B0GTE1 492 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 WDR91A4D1P6 747 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 KLF11O14901 512 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 KRT33AO76009 404 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 CDH2P19022 906 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 ACAA2P42765 397 aaKnown RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 PPOXP50336 477 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 UBE2NP61088 152 aaKnown RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 COPZ1P61923 177 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 VSNL1P62760 191 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 LIN52Q52LA3 116 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 FAM120AOSQ5T036 256 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 RNF220Q5VTB9 566 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 CREB3L2Q70SY1 520 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 SLC46A3Q7Z3Q1 461 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 SPATA19Q7Z5L4 167 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 ARIH2OSQ8N7S6 290 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 GLB1L3Q8NCI6 653 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 OR4F15Q8NGB8 312 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 MSI2Q96DH6 328 aaKnown RBP11.19□□□□□ -0.62
PTCH1-221ENST00000550914 TEX37Q96LM6 180 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 OR52E6Q96RD3 313 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 NUF2Q9BZD4 464 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 LINC00470Q9BZP3 86 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 PLK3Q9H4B4 646 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms