RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 RGS16O15492 202 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 CRYAAP02489 173 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 THBS2P35442 1172 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 ZSWIM7Q19AV6 140 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 KRT71Q3SY84 523 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 MRPL2Q5T653 305 aaKnown RBP20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 TMEM99Q8N816 258 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF540Q8NDQ6 660 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 OR9K2Q8NGE7 335 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 ADAM19Q9H013 955 aa20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 SSU72Q9NP77 194 aaKnown RBP20.18■□□□□ 0.82
SMARCD1-209ENST00000550477 PRAMEF27A3QJZ7 478 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 TMEM247A6NEH6 219 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF587BE7ETH6 402 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 AKR7A3O95154 331 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 PGRP06401 933 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 IGHV4-31P0DP07 118 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 HNF1AP20823 631 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 VSNL1P62760 191 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 STX3Q13277 289 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 FAM166AQ6J272 317 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 OGFOD2Q6N063 350 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 SPATA19Q7Z5L4 167 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 AURKBQ96GD4 344 aaPredicted RBP20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 BOD1Q96IK1 185 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF317Q96PQ6 595 aaPredicted RBP20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 MEAF6Q9HAF1 191 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF232Q9UNY5 417 aa20.17■□□□□ 0.82
SMARCD1-209ENST00000550477 A0A096LPI6 279 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 ZC3H12DA2A288 527 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 LIPT2A6NK58 231 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 AQP7P3A6NL99 342 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 A8MVM7 634 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 CHRM4P08173 479 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 SRD5A1P18405 259 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 NME5P56597 212 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 GGTLC2Q14390 218 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 CARTPTQ16568 116 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 SWI5Q1ZZU3 235 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 LIN52Q52LA3 116 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 WBP2NLQ6ICG8 309 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 SLC46A3Q7Z3Q1 461 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 CADM2Q8N3J6 435 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 NANOS1Q8WY41 292 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 SLC38A2Q96QD8 506 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 VRK1Q99986 396 aaPredicted RBP20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 ADPRHL2Q9NX46 363 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 P2RX2Q9UBL9 471 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 MXRA5Q9NR99 2828 aa20.16■□□□□ 0.82
SMARCD1-209ENST00000550477 LOC390937A0A1W2PQ73 354 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 KLF11O14901 512 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 ERCC1P07992 297 aaPredicted RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 APEHP13798 732 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF16P17020 682 aaPredicted RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 NCF2P19878 526 aaPredicted RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 RPS4Y1P22090 263 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 SERPINF1P36955 418 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 CRISP3P54108 245 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 LARS2Q15031 903 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 IQCCQ4KMZ1 466 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 GLB1L3Q8NCI6 653 aaPredicted RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF385AQ96PM9 386 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 KATNB1Q9BVA0 655 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 HAO1Q9UJM8 370 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 ARFGEF3Q5TH69 2177 aa20.15■□□□□ 0.82
SMARCD1-209ENST00000550477 ANK3Q12955 4377 aaKnown RBP20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 LOC100289279A0A1B0GTE1 492 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 B9A039 149 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 RFXANKO14593 260 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 ANP32DO95626 131 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 IL6P05231 212 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 HOXB1P14653 301 aaPredicted RBP20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 UFM1P61960 85 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 SLC25A3Q00325 362 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 PLAURQ03405 335 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 HIKESHIQ53FT3 197 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 OR52P1PQ8NH57 321 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 AENQ8WTP8 325 aaKnown RBP20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 SORT1Q99523 831 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 C20orf27Q9GZN8 174 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 RAB1BQ9H0U4 201 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 KCNK9Q9NPC2 374 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 AIG1Q9NVV5 245 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 THUMPD1Q9NXG2 353 aaKnown RBP20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 RASD1Q9Y272 281 aa20.14■□□□□ 0.81
SMARCD1-209ENST00000550477 CDHR4A6H8M9 788 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 TRPC5OSA6NMA1 111 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 PDE5AO76074 875 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 GSNP06396 782 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 GTF2E2P29084 291 aaKnown RBP20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 NR4A2P43354 598 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 TBRG1Q3YBR2 411 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 PRAMEF8Q5VWM4 474 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 PRAMEF7Q5VXH5 474 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 ZIC4Q8N9L1 334 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 OR1K1Q8NGR3 316 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 PNPT1Q8TCS8 783 aaKnown RBP20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 PAIP2Q9BPZ3 127 aaKnown RBP20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 CA10Q9NS85 328 aa20.13■□□□□ 0.81
SMARCD1-209ENST00000550477 RLIMQ9NVW2 624 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms