RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MAPK11Q15759 364 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 ZNF311Q5JNZ3 666 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 KLHL24Q6TFL4 600 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 ZNF836Q6ZNA1 936 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 AAED1Q7RTV5 226 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 NET1Q7Z628 596 aaPredicted RBP9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 VRK2Q86Y07 508 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 FBXL14Q8N1E6 418 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 BHLHE22Q8NFJ8 381 aaPredicted RBP9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 OR9K2Q8NGE7 335 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 OR52N5Q8NH56 324 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 BBS10Q8TAM1 723 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 LRRC8CQ8TDW0 803 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 GTF2H4Q92759 462 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 VPS33AQ96AX1 596 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 TMEM19Q96HH6 336 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 OR52B2Q96RD2 323 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 CCDC28BQ9BUN5 200 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 SPATA5L1Q9BVQ7 753 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 AMBRA1Q9C0C7 1298 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 RABEP2Q9H5N1 569 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 EVA1AQ9H8M9 152 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 C12orf10Q9HB07 376 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 A4GALTQ9NPC4 353 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 CBLN4Q9NTU7 201 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 RASD1Q9Y272 281 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 PCDHB14Q9Y5E9 798 aa9.57□□□□□ -0.88
VTI1BP3-201ENST00000550220 FREM1Q5H8C1 2179 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 PRR14LQ5THK1 2151 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 OR2T1O43869 369 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 RAMP1O60894 148 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 AKR7A3O95154 331 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 AHSA1O95433 338 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 CD8AP01732 235 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 C1QCP02747 245 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 TP53P04637 393 aaPredicted RBP9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 ITGA5P08648 1049 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 PRKAR1BP31321 381 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 TTKP33981 857 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 NTF4P34130 210 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 CDKN1AP38936 164 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 ZNF83P51522 516 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 CHRNB3Q05901 458 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 TNK1Q13470 666 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 C1orf140Q5VVS0 124 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 MAVSQ7Z434 540 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 GPAT4Q86UL3 456 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 KRT73Q86Y46 540 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 MUC15Q8N387 334 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 TMEM99Q8N816 258 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 ANKK1Q8NFD2 765 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 OR52E4Q8NGH9 312 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 MFSD8Q8NHS3 518 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 DNAJA4Q8WW22 397 aaPredicted RBP9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 NEUROG1Q92886 237 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 ZBTB9Q96C00 473 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 RHNO1Q9BSD3 238 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 SLCO5A1Q9H2Y9 848 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 SLC17A5Q9NRA2 495 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 SLC7A10Q9NS82 523 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 SLC6A13Q9NSD5 602 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 NPAP1Q9NZP6 1156 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 RPS6KB2Q9UBS0 482 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 GMEB1Q9Y692 573 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 CADP27708 2225 aa9.56□□□□□ -0.88
VTI1BP3-201ENST00000550220 RAI1Q7Z5J4 1906 aaPredicted RBP9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 ZC3H12DA2A288 527 aaKnown RBP9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 PRORSD1PA6NEY8 169 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 EVPLLA8MZ36 301 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 E7EQL1 145 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 M0R1B8 84 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 NPIPB7O75200 414 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 SERPINB7O75635 380 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 PNMTP11086 282 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 GTF2E2P29084 291 aaKnown RBP9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 FABP6P51161 128 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 MFSD13AQ14CX5 517 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 RAB35Q15286 201 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 LRIF1Q5T3J3 769 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 TSPO2Q5TGU0 170 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 REEP3Q6NUK4 255 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 ATG4DQ86TL0 474 aaPredicted RBP9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 CLIP4Q8N3C7 705 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 LSMEM1Q8N8F7 131 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 OR9I1Q8NGQ6 314 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 C3orf49Q96BT1 292 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 SPDL1Q96EA4 605 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 DNAJA3Q96EY1 480 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 PAIP1Q9H074 479 aaKnown RBP9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 ADPRHL2Q9NX46 363 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 SELENONQ9NZV5 590 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 FBXO9Q9UK97 447 aaPredicted RBP9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 B3GALT5Q9Y2C3 310 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 PMF1-BGLAPU3KQ54 211 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 JMJD1CQ15652 2540 aa9.55□□□□□ -0.88
VTI1BP3-201ENST00000550220 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms