RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 C1orf53Q5VUE5 145 aa15.03■□□□□ -0
CUX1-213ENST00000549414 PPP1R3BQ86XI6 285 aa15.03■□□□□ -0
CUX1-213ENST00000549414 GPR32P1Q8NGA4 272 aa15.03■□□□□ -0
CUX1-213ENST00000549414 ABHD4Q8TB40 342 aa15.03■□□□□ -0
CUX1-213ENST00000549414 LCORQ96JN0 433 aaPredicted RBP15.03■□□□□ -0
CUX1-213ENST00000549414 OR6C1Q96RD1 312 aa15.03■□□□□ -0
CUX1-213ENST00000549414 OR2B2Q9GZK3 357 aa15.03■□□□□ -0
CUX1-213ENST00000549414 PPIL3Q9H2H8 161 aaKnown RBP15.03■□□□□ -0
CUX1-213ENST00000549414 PLCXD1Q9NUJ7 323 aa15.03■□□□□ -0
CUX1-213ENST00000549414 HPF1Q9NWY4 346 aa15.03■□□□□ -0
CUX1-213ENST00000549414 V9GY05 133 aa15.03■□□□□ -0
CUX1-213ENST00000549414 CIB4A0PJX0 185 aa15.03■□□□□ -0
CUX1-213ENST00000549414 CTSVO60911 334 aa15.03■□□□□ -0
CUX1-213ENST00000549414 P04436 131 aa15.03■□□□□ -0
CUX1-213ENST00000549414 SNU13P55769 128 aaKnown RBP15.03■□□□□ -0
CUX1-213ENST00000549414 SIRPAP78324 504 aa15.03■□□□□ -0
CUX1-213ENST00000549414 BTLAQ7Z6A9 289 aa15.03■□□□□ -0
CUX1-213ENST00000549414 SPERTQ8NA61 448 aa15.03■□□□□ -0
CUX1-213ENST00000549414 SIMC1Q8NDZ2 872 aa15.03■□□□□ -0
CUX1-213ENST00000549414 OR14L1PQ8NHC6 308 aa15.03■□□□□ -0
CUX1-213ENST00000549414 SYNPRQ8TBG9 265 aa15.03■□□□□ -0
CUX1-213ENST00000549414 NAT6Q93015 286 aa15.03■□□□□ -0
CUX1-213ENST00000549414 BMFQ96LC9 184 aa15.03■□□□□ -0
CUX1-213ENST00000549414 POTEKPQ9BYX7 375 aa15.03■□□□□ -0
CUX1-213ENST00000549414 CASP8AP2Q9UKL3 1982 aa15.03■□□□□ -0
CUX1-213ENST00000549414 ZSCAN5BA6NJL1 495 aa15.02■□□□□ -0
CUX1-213ENST00000549414 C2CD4DB7Z1M9 353 aa15.02■□□□□ -0
CUX1-213ENST00000549414 CHP2O43745 196 aa15.02■□□□□ -0
CUX1-213ENST00000549414 KCNK2O95069 426 aa15.02■□□□□ -0
CUX1-213ENST00000549414 F10P00742 488 aa15.02■□□□□ -0
CUX1-213ENST00000549414 AMY2AP04746 511 aa15.02■□□□□ -0
CUX1-213ENST00000549414 TRHRP34981 398 aaPredicted RBP15.02■□□□□ -0
CUX1-213ENST00000549414 SOX18P35713 384 aa15.02■□□□□ -0
CUX1-213ENST00000549414 UGT2B10P36537 528 aa15.02■□□□□ -0
CUX1-213ENST00000549414 RPS27P42677 84 aaKnown RBP15.02■□□□□ -0
CUX1-213ENST00000549414 SPOCK1Q08629 439 aa15.02■□□□□ -0
CUX1-213ENST00000549414 MELKQ14680 651 aa15.02■□□□□ -0
CUX1-213ENST00000549414 TBC1D25Q3MII6 688 aa15.02■□□□□ -0
CUX1-213ENST00000549414 TSLPQ969D9 159 aa15.02■□□□□ -0
CUX1-213ENST00000549414 SH3BGRL2Q9UJC5 107 aa15.02■□□□□ -0
CUX1-213ENST00000549414 A0A0X1KG70 313 aa15.02■□□□□ -0
CUX1-213ENST00000549414 A0A1W2PS29 197 aa15.02■□□□□ -0
CUX1-213ENST00000549414 DISC1C4P0D8 188 aa15.02■□□□□ -0
CUX1-213ENST00000549414 SULT2B1O00204 365 aa15.02■□□□□ -0
CUX1-213ENST00000549414 GREM1O60565 184 aa15.02■□□□□ -0
CUX1-213ENST00000549414 SLC2A5P22732 501 aa15.02■□□□□ -0
CUX1-213ENST00000549414 ARHGAP11BQ3KRB8 267 aa15.02■□□□□ -0
CUX1-213ENST00000549414 Q7L0L9 218 aa15.02■□□□□ -0
CUX1-213ENST00000549414 CAMKMTQ7Z624 323 aa15.02■□□□□ -0
CUX1-213ENST00000549414 TEAD3Q99594 435 aa15.02■□□□□ -0
CUX1-213ENST00000549414 BCL2L10Q9HD36 194 aa15.02■□□□□ -0
CUX1-213ENST00000549414 CXorf51AA0A1B0GTR3 108 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 ZNF749O43361 778 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 CREBL2O60519 120 aaPredicted RBP15.02□□□□□ -0.01
CUX1-213ENST00000549414 ZNF84P51523 738 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 PDSS1Q5T2R2 415 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 SYT9Q86SS6 491 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 ZNF615Q8N8J6 731 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 KANTRA0A1W2PQU2 76 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 SELENOFO60613 162 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 PRSS23O95084 383 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 CRABP1P29762 137 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 CEBPGP53567 150 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 SF3A2Q15428 464 aaKnown RBP15.02□□□□□ -0.01
CUX1-213ENST00000549414 PAPD4Q6PIY7 484 aaKnown RBP15.02□□□□□ -0.01
CUX1-213ENST00000549414 IQCF2Q8IXL9 164 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 THAP6Q8TBB0 222 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 ITPKCQ96DU7 683 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 RBM38Q9H0Z9 239 aaKnown RBP15.02□□□□□ -0.01
CUX1-213ENST00000549414 B3GAT2Q9NPZ5 323 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 BOLA1Q9Y3E2 137 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 ASB4Q9Y574 426 aa15.02□□□□□ -0.01
CUX1-213ENST00000549414 ARPC1BO15143 372 aaKnown RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 SUSD5O60279 629 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 LIPCP11150 499 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 PRSS3P35030 304 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 FGFBP1Q14512 234 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 CTF1Q16619 201 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 RNASE10Q5GAN6 216 aaKnown RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 OR4N2Q8NGD1 307 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 ZNF566Q969W8 418 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 SLC39A1Q9NY26 324 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 PCDHGB2Q9Y5G2 931 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 PHYHO14832 338 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 FARS2O95363 451 aaKnown RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 GRK5P34947 590 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 LRRC28Q86X40 367 aaPredicted RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 OR5T2Q8NGG2 359 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 GOT1L1Q8NHS2 421 aaPredicted RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 ZNF486Q96H40 463 aaPredicted RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 CDCA4Q9BXL8 241 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 RCE1Q9Y256 329 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 P2RX6O15547 441 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 FZD7O75084 574 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 TCEAL6Q6IPX3 200 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 C16orf52Q8NHV5 167 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 OPALINQ96PE5 141 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 DUSP23Q9BVJ7 150 aa15.01□□□□□ -0.01
CUX1-213ENST00000549414 RANGRFQ9HD47 186 aaPredicted RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 INPP5EQ9NRR6 644 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms